RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 SIRT2Q8IXJ6 389 aa24.29■■□□□ 1.48
PTCD1-203ENST00000430029 PNMA6EA0A0J9YXQ4 647 aa24.28■■□□□ 1.48
PTCD1-203ENST00000430029 KLRG2A4D1S0 409 aaPredicted RBP24.28■■□□□ 1.48
PTCD1-203ENST00000430029 ATP8B2P98198 1209 aa24.28■■□□□ 1.48
PTCD1-203ENST00000430029 MTX1Q13505 466 aa24.28■■□□□ 1.48
PTCD1-203ENST00000430029 FAM161AQ3B820 660 aa24.27■■□□□ 1.48
PTCD1-203ENST00000430029 CRY2Q49AN0 593 aa24.27■■□□□ 1.48
PTCD1-203ENST00000430029 GREM2Q9H772 168 aa24.27■■□□□ 1.48
PTCD1-203ENST00000430029 KIF13BQ9NQT8 1826 aa24.26■■□□□ 1.47
PTCD1-203ENST00000430029 RPAP2Q8IXW5 612 aaPredicted RBP24.26■■□□□ 1.47
PTCD1-203ENST00000430029 CCDC152Q4G0S7 254 aa24.25■■□□□ 1.47
PTCD1-203ENST00000430029 CHMP3Q9Y3E7 222 aa24.25■■□□□ 1.47
PTCD1-203ENST00000430029 COL11A2P13942 1736 aaPredicted RBP24.24■■□□□ 1.47
PTCD1-203ENST00000430029 SRGAP3O43295 1099 aa24.24■■□□□ 1.47
PTCD1-203ENST00000430029 PDE6BP35913 854 aa24.24■■□□□ 1.47
PTCD1-203ENST00000430029 RFX5P48382 616 aaPredicted RBP24.24■■□□□ 1.47
PTCD1-203ENST00000430029 POLA2Q14181 598 aa24.24■■□□□ 1.47
PTCD1-203ENST00000430029 SEC31BQ9NQW1 1179 aa24.24■■□□□ 1.47
PTCD1-203ENST00000430029 COL4A1P02462 1669 aa24.24■■□□□ 1.47
PTCD1-203ENST00000430029 ERICH6BQ5W0A0 696 aa24.23■■□□□ 1.47
PTCD1-203ENST00000430029 SSH3Q8TE77 659 aa24.23■■□□□ 1.47
PTCD1-203ENST00000430029 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
PTCD1-203ENST00000430029 ITGA6P23229 1130 aa24.22■■□□□ 1.47
PTCD1-203ENST00000430029 C2CD5Q86YS7 1000 aa24.22■■□□□ 1.47
PTCD1-203ENST00000430029 TAF1P21675 1872 aa24.21■■□□□ 1.47
PTCD1-203ENST00000430029 SRGNP10124 158 aa24.21■■□□□ 1.47
PTCD1-203ENST00000430029 CHRNA5P30532 468 aa24.21■■□□□ 1.47
PTCD1-203ENST00000430029 KLHDC4Q8TBB5 520 aa24.21■■□□□ 1.47
PTCD1-203ENST00000430029 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
PTCD1-203ENST00000430029 HOXA10P31260 410 aaPredicted RBP24.2■■□□□ 1.46
PTCD1-203ENST00000430029 IFIT5Q13325 482 aaKnown RBP24.2■■□□□ 1.46
PTCD1-203ENST00000430029 ZNF594Q96JF6 807 aaPredicted RBP24.2■■□□□ 1.46
PTCD1-203ENST00000430029 ANKRD18BA2A2Z9 1011 aa24.19■■□□□ 1.46
PTCD1-203ENST00000430029 PTPN12Q05209 780 aaKnown RBP24.19■■□□□ 1.46
PTCD1-203ENST00000430029 CCDC57Q2TAC2 916 aa24.19■■□□□ 1.46
PTCD1-203ENST00000430029 RPGRQ92834 1020 aaKnown RBP24.19■■□□□ 1.46
PTCD1-203ENST00000430029 PA2G4Q9UQ80 394 aaKnown RBP24.19■■□□□ 1.46
PTCD1-203ENST00000430029 CD2APQ9Y5K6 639 aa24.19■■□□□ 1.46
PTCD1-203ENST00000430029 H0YIN7 160 aa24.18■■□□□ 1.46
PTCD1-203ENST00000430029 IGHDP01880 384 aa24.18■■□□□ 1.46
PTCD1-203ENST00000430029 NPR1P16066 1061 aa24.18■■□□□ 1.46
PTCD1-203ENST00000430029 DDX46Q7L014 1031 aaKnown RBP24.18■■□□□ 1.46
PTCD1-203ENST00000430029 KLHL34Q8N239 644 aa24.18■■□□□ 1.46
PTCD1-203ENST00000430029 CELF1Q92879 486 aaKnown RBP24.18■■□□□ 1.46
PTCD1-203ENST00000430029 PPP1R1BQ9UD71 204 aaPredicted RBP24.18■■□□□ 1.46
PTCD1-203ENST00000430029 DPEP1P16444 411 aa24.17■■□□□ 1.46
PTCD1-203ENST00000430029 HDAC1Q13547 482 aaPredicted RBP24.17■■□□□ 1.46
PTCD1-203ENST00000430029 MASTLQ96GX5 879 aa24.17■■□□□ 1.46
PTCD1-203ENST00000430029 RBM17Q96I25 401 aaKnown RBP24.17■■□□□ 1.46
PTCD1-203ENST00000430029 COPRSQ9NQ92 184 aa24.17■■□□□ 1.46
PTCD1-203ENST00000430029 PDZRN3Q9UPQ7 1066 aa24.17■■□□□ 1.46
PTCD1-203ENST00000430029 A0A0G2JLW4 131 aa24.16■■□□□ 1.46
PTCD1-203ENST00000430029 HMMRO75330 724 aa24.16■■□□□ 1.46
PTCD1-203ENST00000430029 KCNA3P22001 575 aa24.16■■□□□ 1.46
PTCD1-203ENST00000430029 TGFB2P61812 414 aa24.16■■□□□ 1.46
PTCD1-203ENST00000430029 CRAMP1Q96RY5 1269 aa24.16■■□□□ 1.46
PTCD1-203ENST00000430029 GRAPQ13588 217 aa24.15■■□□□ 1.46
PTCD1-203ENST00000430029 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
PTCD1-203ENST00000430029 GRAPLQ8TC17 118 aaPredicted RBP24.15■■□□□ 1.46
PTCD1-203ENST00000430029 ZNF622Q969S3 477 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTCD1-203ENST00000430029 DLEC1Q9Y238 1755 aa24.15■■□□□ 1.46
PTCD1-203ENST00000430029 CDC5LQ99459 802 aaKnown RBP24.14■■□□□ 1.45
PTCD1-203ENST00000430029 PUS3Q9BZE2 481 aaKnown RBP24.14■■□□□ 1.45
PTCD1-203ENST00000430029 PPP4R2Q9NY27 417 aa24.14■■□□□ 1.45
PTCD1-203ENST00000430029 GTF3C3Q9Y5Q9 886 aa24.14■■□□□ 1.45
PTCD1-203ENST00000430029 SPEF2Q9C093 1822 aa24.13■■□□□ 1.45
PTCD1-203ENST00000430029 RPS8P62241 208 aaKnown RBP24.13■■□□□ 1.45
PTCD1-203ENST00000430029 TAF7LQ5H9L4 462 aa24.13■■□□□ 1.45
PTCD1-203ENST00000430029 SLC51AQ86UW1 340 aa24.13■■□□□ 1.45
PTCD1-203ENST00000430029 ANKRD18AQ8IVF6 992 aa24.13■■□□□ 1.45
PTCD1-203ENST00000430029 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
PTCD1-203ENST00000430029 FHDC1Q9C0D6 1143 aaPredicted RBP24.13■■□□□ 1.45
PTCD1-203ENST00000430029 RWDD1Q9H446 243 aaPredicted RBP24.13■■□□□ 1.45
PTCD1-203ENST00000430029 NOP58Q9Y2X3 529 aaKnown RBP24.13■■□□□ 1.45
PTCD1-203ENST00000430029 SURF6O75683 361 aaKnown RBP24.12■■□□□ 1.45
PTCD1-203ENST00000430029 LRRC24Q50LG9 513 aa24.12■■□□□ 1.45
PTCD1-203ENST00000430029 SIL1Q9H173 461 aa24.12■■□□□ 1.45
PTCD1-203ENST00000430029 DCTPP1Q9H773 170 aa24.12■■□□□ 1.45
PTCD1-203ENST00000430029 IGHMBP2P38935 993 aaKnown RBP24.11■■□□□ 1.45
PTCD1-203ENST00000430029 B4GALNT3Q6L9W6 998 aa24.11■■□□□ 1.45
PTCD1-203ENST00000430029 EXOC6BQ9Y2D4 811 aa24.11■■□□□ 1.45
PTCD1-203ENST00000430029 EYA2O00167 538 aa24.1■■□□□ 1.45
PTCD1-203ENST00000430029 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
PTCD1-203ENST00000430029 LDHAL6AQ6ZMR3 332 aa24.1■■□□□ 1.45
PTCD1-203ENST00000430029 ATG9AQ7Z3C6 839 aa24.1■■□□□ 1.45
PTCD1-203ENST00000430029 SLX4Q8IY92 1834 aa24.1■■□□□ 1.45
PTCD1-203ENST00000430029 CACNA1SQ13698 1873 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 BBOX1O75936 387 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 CNKSR1Q969H4 720 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 MPHOSPH8Q99549 860 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 BSDC1Q9NW68 430 aaPredicted RBP24.09■■□□□ 1.45
PTCD1-203ENST00000430029 RIPOR2Q9Y4F9 1068 aa24.09■■□□□ 1.45
PTCD1-203ENST00000430029 BRCA1P38398 1863 aaKnown RBP24.09■■□□□ 1.45
PTCD1-203ENST00000430029 CIAO1O76071 339 aa24.08■■□□□ 1.45
PTCD1-203ENST00000430029 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
PTCD1-203ENST00000430029 CNNM1Q9NRU3 951 aa24.08■■□□□ 1.45
PTCD1-203ENST00000430029 FBXO3Q9UK99 471 aa24.08■■□□□ 1.45
PTCD1-203ENST00000430029 PPEF1O14829 653 aaPredicted RBP24.07■■□□□ 1.44
PTCD1-203ENST00000430029 G3BP1Q13283 466 aaKnown RBP eCLIP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms