RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 SLIT1O75093 1534 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 SLC39A6Q13433 755 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 PDIA6Q15084 440 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 DRC7Q8IY82 874 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 TAF5LO75529 589 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 CBX1P83916 185 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 COL15A1P39059 1388 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 GOLGA6L6A8MZA4 724 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 CEBPZQ03701 1054 aaKnown RBP18.64■□□□□ 0.57
GHDC-203ENST00000428494 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.57
GHDC-203ENST00000428494 LRRC2Q9BYS8 371 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
GHDC-203ENST00000428494 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
GHDC-203ENST00000428494 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
GHDC-203ENST00000428494 ANKRD1Q15327 319 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 TRIM5Q9C035 493 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
GHDC-203ENST00000428494 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
GHDC-203ENST00000428494 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
GHDC-203ENST00000428494 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 UTYO14607 1347 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 NFAT5O94916 1531 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 FOSBP53539 338 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 BRF1Q92994 677 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
GHDC-203ENST00000428494 PPFIA3O75145 1194 aa18.61■□□□□ 0.57
GHDC-203ENST00000428494 TPM3P06753 285 aa18.61■□□□□ 0.57
GHDC-203ENST00000428494 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
GHDC-203ENST00000428494 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
GHDC-203ENST00000428494 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
GHDC-203ENST00000428494 SMAP1Q8IYB5 467 aaPredicted RBP18.61■□□□□ 0.57
GHDC-203ENST00000428494 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
GHDC-203ENST00000428494 GCP02774 474 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 ZNF165P49910 485 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
GHDC-203ENST00000428494 Q6ZUG5 572 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 ANKRD24Q8TF21 1146 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 C16orf45Q96MC5 204 aaPredicted RBP18.6■□□□□ 0.57
GHDC-203ENST00000428494 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 NEURL1BA8MQ27 555 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 ZNF75DP51815 510 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 SLFNL1Q499Z3 407 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 GTF3C6Q969F1 213 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 NEK1Q96PY6 1258 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 DNAJC2Q99543 621 aaKnown RBP18.6■□□□□ 0.57
GHDC-203ENST00000428494 MYD88Q99836 296 aa18.6■□□□□ 0.57
GHDC-203ENST00000428494 FTOQ9C0B1 505 aaKnown RBP eCLIP18.6■□□□□ 0.57
GHDC-203ENST00000428494 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
GHDC-203ENST00000428494 DDX19AQ9NUU7 478 aaKnown RBP18.6■□□□□ 0.57
GHDC-203ENST00000428494 A0A087WWV3 80 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
GHDC-203ENST00000428494 TFCP2Q12800 502 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
GHDC-203ENST00000428494 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
GHDC-203ENST00000428494 GCKRQ14397 625 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
GHDC-203ENST00000428494 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 PLA2G4DQ86XP0 818 aa18.59■□□□□ 0.57
GHDC-203ENST00000428494 CYP21A2P08686 494 aa18.58■□□□□ 0.57
GHDC-203ENST00000428494 RESTQ13127 1097 aa18.58■□□□□ 0.57
GHDC-203ENST00000428494 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.57
GHDC-203ENST00000428494 ZSCAN25Q6NSZ9 544 aa18.58■□□□□ 0.57
GHDC-203ENST00000428494 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.57
GHDC-203ENST00000428494 USP54Q70EL1 1684 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 H3BQV1 296 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 CCDC144BQ3MJ40 725 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 IFFO2Q5TF58 517 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 CCDC144CPQ8IYA2 1237 aa18.58■□□□□ 0.56
GHDC-203ENST00000428494 ARHGEF25Q86VW2 580 aa18.57■□□□□ 0.56
GHDC-203ENST00000428494 PDCL2Q8N4E4 241 aa18.57■□□□□ 0.56
GHDC-203ENST00000428494 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
GHDC-203ENST00000428494 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
GHDC-203ENST00000428494 TDRD7Q8NHU6 1098 aaKnown RBP18.57■□□□□ 0.56
GHDC-203ENST00000428494 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
GHDC-203ENST00000428494 ORAI2Q96SN7 254 aa18.57■□□□□ 0.56
GHDC-203ENST00000428494 ZSCAN20P17040 1043 aaPredicted RBP18.56■□□□□ 0.56
GHDC-203ENST00000428494 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 SCRN1Q12765 414 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 U2AF2P26368 475 aaKnown RBP eCLIP18.56■□□□□ 0.56
GHDC-203ENST00000428494 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
GHDC-203ENST00000428494 NAA30Q147X3 362 aaPredicted RBP18.56■□□□□ 0.56
GHDC-203ENST00000428494 TNNI3KQ59H18 835 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms