RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 CIAO1O76071 339 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 AK2P54819 239 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 CPA1P15085 419 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 HLFQ16534 295 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 L1TD1Q5T7N2 865 aaKnown RBP16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 ZBTB38Q8NAP3 1195 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
APOBEC3D-202ENST00000427494 DDB1Q16531 1140 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 PUS3Q9BZE2 481 aaKnown RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 A0A0G2JS52 829 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 GOLGA6L3A6NEY3 463 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 GPTP24298 496 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 TIMM10P62072 90 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
APOBEC3D-202ENST00000427494 NUP98P52948 1817 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 SLC27A2O14975 620 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 JCADQ9P266 1359 aa16.81■□□□□ 0.28
APOBEC3D-202ENST00000427494 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 NLRP10Q86W26 655 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 NWD2Q9ULI1 1742 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 BRD1O95696 1058 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
APOBEC3D-202ENST00000427494 A0A1B0GUL7 405 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 MYH3P11055 1940 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 KBTBD3Q8NAB2 608 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
APOBEC3D-202ENST00000427494 GOLIM4O00461 696 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 TAF5LO75529 589 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 CSF1RP07333 972 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 IFIT5Q13325 482 aaKnown RBP16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 PAG1Q9NWQ8 432 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 CHGBP05060 677 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 PSMA5P28066 241 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
APOBEC3D-202ENST00000427494 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
APOBEC3D-202ENST00000427494 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
APOBEC3D-202ENST00000427494 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
APOBEC3D-202ENST00000427494 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 LARGE1O95461 756 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 SEC62Q99442 399 aaKnown RBP16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 AKAP2Q9Y2D5 859 aa16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3D-202ENST00000427494 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
APOBEC3D-202ENST00000427494 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
APOBEC3D-202ENST00000427494 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
APOBEC3D-202ENST00000427494 SLIT2O94813 1529 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 IRS4O14654 1257 aaPredicted RBP16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 CTSWP56202 376 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 TOM1O60784 492 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 ITGA6P23229 1130 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 BLOC1S2Q6QNY1 142 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms