RNA–Protein interactions for RNA: ENST00000427473.2

CTLA4-203, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 5 BASIC

Gene CTLA4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-203ENST00000427473 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
CTLA4-203ENST00000427473 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
CTLA4-203ENST00000427473 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
CTLA4-203ENST00000427473 PDE8AO60658 829 aa16.34■□□□□ 0.21
CTLA4-203ENST00000427473 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
CTLA4-203ENST00000427473 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
CTLA4-203ENST00000427473 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
CTLA4-203ENST00000427473 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
CTLA4-203ENST00000427473 ABCC4O15439 1325 aa16.34■□□□□ 0.21
CTLA4-203ENST00000427473 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
CTLA4-203ENST00000427473 GRM8O00222 908 aa16.33■□□□□ 0.2
CTLA4-203ENST00000427473 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.2
CTLA4-203ENST00000427473 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
CTLA4-203ENST00000427473 TRIM27P14373 513 aa16.32■□□□□ 0.2
CTLA4-203ENST00000427473 CTSWP56202 376 aa16.32■□□□□ 0.2
CTLA4-203ENST00000427473 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
CTLA4-203ENST00000427473 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
CTLA4-203ENST00000427473 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
CTLA4-203ENST00000427473 COL4A1P02462 1669 aa16.31■□□□□ 0.2
CTLA4-203ENST00000427473 UTYO14607 1347 aa16.31■□□□□ 0.2
CTLA4-203ENST00000427473 CCT4P50991 539 aaKnown RBP16.31■□□□□ 0.2
CTLA4-203ENST00000427473 GRAPQ13588 217 aa16.31■□□□□ 0.2
CTLA4-203ENST00000427473 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
CTLA4-203ENST00000427473 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
CTLA4-203ENST00000427473 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 RTL9Q8NET4 1388 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 PPEF1O14829 653 aaPredicted RBP16.3■□□□□ 0.2
CTLA4-203ENST00000427473 C21orf2O43822 256 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 SOGA3Q5TF21 947 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 C7orf43Q8WVR3 580 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 C9orf78Q9NZ63 289 aaPredicted RBP16.3■□□□□ 0.2
CTLA4-203ENST00000427473 LRRC37AA6NMS7 1700 aa16.3■□□□□ 0.2
CTLA4-203ENST00000427473 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
CTLA4-203ENST00000427473 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
CTLA4-203ENST00000427473 MYH3P11055 1940 aa16.28■□□□□ 0.2
CTLA4-203ENST00000427473 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
CTLA4-203ENST00000427473 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
CTLA4-203ENST00000427473 INTS3Q68E01 1043 aaKnown RBP16.28■□□□□ 0.2
CTLA4-203ENST00000427473 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
CTLA4-203ENST00000427473 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
CTLA4-203ENST00000427473 NFKBIEO00221 500 aa16.27■□□□□ 0.2
CTLA4-203ENST00000427473 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
CTLA4-203ENST00000427473 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
CTLA4-203ENST00000427473 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
CTLA4-203ENST00000427473 GREM2Q9H772 168 aa16.27■□□□□ 0.2
CTLA4-203ENST00000427473 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.19
CTLA4-203ENST00000427473 LTBP3Q9NS15 1303 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 BBOX1O75936 387 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 CSF1RP07333 972 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 FOXO4P98177 505 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 RASSF7Q02833 373 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 CC2D2BQ6DHV5 1058 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 OLFM4Q6UX06 510 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 USP44Q9H0E7 712 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
CTLA4-203ENST00000427473 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
CTLA4-203ENST00000427473 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
CTLA4-203ENST00000427473 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
CTLA4-203ENST00000427473 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
CTLA4-203ENST00000427473 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
CTLA4-203ENST00000427473 DZIP1LQ8IYY4 767 aaKnown RBP16.24■□□□□ 0.19
CTLA4-203ENST00000427473 RTKN2Q8IZC4 609 aa16.24■□□□□ 0.19
CTLA4-203ENST00000427473 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
CTLA4-203ENST00000427473 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
CTLA4-203ENST00000427473 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
CTLA4-203ENST00000427473 TAF1P21675 1872 aa16.23■□□□□ 0.19
CTLA4-203ENST00000427473 DUOX1Q9NRD9 1551 aa16.23■□□□□ 0.19
CTLA4-203ENST00000427473 ITGA6P23229 1130 aa16.23■□□□□ 0.19
CTLA4-203ENST00000427473 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
CTLA4-203ENST00000427473 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTLA4-203ENST00000427473 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
CTLA4-203ENST00000427473 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
CTLA4-203ENST00000427473 MEIS3Q99687 375 aa16.23■□□□□ 0.19
CTLA4-203ENST00000427473 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 CHD4Q14839 1912 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
CTLA4-203ENST00000427473 RLBP1P12271 317 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 PRELPP51888 382 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 ANKRD44Q8N8A2 993 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 PSMD1Q99460 953 aa16.22■□□□□ 0.19
CTLA4-203ENST00000427473 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
CTLA4-203ENST00000427473 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
CTLA4-203ENST00000427473 LMNB1P20700 586 aa16.21■□□□□ 0.19
CTLA4-203ENST00000427473 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
CTLA4-203ENST00000427473 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 GNAI3P08754 354 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 MS4A1P11836 297 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 C9orf131Q5VYM1 1079 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
CTLA4-203ENST00000427473 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
CTLA4-203ENST00000427473 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms