RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 GRIK5Q16478 980 aa9.87□□□□□ -0.83
LINC00458-202ENST00000427299 LPIN3Q9BQK8 851 aa9.87□□□□□ -0.83
LINC00458-202ENST00000427299 C11orf16Q9NQ32 467 aa9.87□□□□□ -0.83
LINC00458-202ENST00000427299 FRRS1LQ9P0K9 344 aa9.87□□□□□ -0.83
LINC00458-202ENST00000427299 ZBTB42B2RXF5 422 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 CPB1P15086 417 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 ARSDP51689 593 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 PERM1Q5SV97 790 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 ARTNQ5T4W7 220 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 DHX32Q7L7V1 743 aaKnown RBP9.86□□□□□ -0.83
LINC00458-202ENST00000427299 TRPM4Q8TD43 1214 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 SSBP4Q9BWG4 385 aaPredicted RBP9.86□□□□□ -0.83
LINC00458-202ENST00000427299 VRTNQ9H8Y1 702 aa9.86□□□□□ -0.83
LINC00458-202ENST00000427299 A6NJR5 290 aa9.85□□□□□ -0.83
LINC00458-202ENST00000427299 FOXO3O43524 673 aa9.85□□□□□ -0.83
LINC00458-202ENST00000427299 LMOD1P29536 600 aaPredicted RBP9.85□□□□□ -0.83
LINC00458-202ENST00000427299 DTWD1Q8N5C7 304 aa9.85□□□□□ -0.83
LINC00458-202ENST00000427299 IFT43Q96FT9 208 aa9.85□□□□□ -0.83
LINC00458-202ENST00000427299 MYO19Q96H55 970 aa9.85□□□□□ -0.83
LINC00458-202ENST00000427299 MICAL2O94851 1124 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 TARSP26639 723 aaKnown RBP9.84□□□□□ -0.83
LINC00458-202ENST00000427299 GPLD1P80108 840 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 PLAURQ03405 335 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 KRT25Q7Z3Z0 450 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 FBXO11Q86XK2 927 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 USP21Q9UK80 565 aa9.84□□□□□ -0.83
LINC00458-202ENST00000427299 NISCHQ9Y2I1 1504 aa9.83□□□□□ -0.84
LINC00458-202ENST00000427299 TTC9Q92623 222 aa9.83□□□□□ -0.84
LINC00458-202ENST00000427299 ZFP64Q9NPA5 681 aa9.83□□□□□ -0.84
LINC00458-202ENST00000427299 C11orf91Q3C1V1 193 aa9.82□□□□□ -0.84
LINC00458-202ENST00000427299 TP53INP1Q96A56 240 aa9.82□□□□□ -0.84
LINC00458-202ENST00000427299 OPLAHO14841 1288 aa9.81□□□□□ -0.84
LINC00458-202ENST00000427299 SASH3O75995 380 aa9.81□□□□□ -0.84
LINC00458-202ENST00000427299 RARAP10276 462 aa9.81□□□□□ -0.84
LINC00458-202ENST00000427299 MLLT1Q03111 559 aaPredicted RBP9.81□□□□□ -0.84
LINC00458-202ENST00000427299 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
LINC00458-202ENST00000427299 ELMSAN1Q6PJG2 1045 aa9.81□□□□□ -0.84
LINC00458-202ENST00000427299 EGFRP00533 1210 aa9.8□□□□□ -0.84
LINC00458-202ENST00000427299 CFAP70Q5T0N1 1121 aa9.8□□□□□ -0.84
LINC00458-202ENST00000427299 WFDC8Q8IUA0 241 aa9.8□□□□□ -0.84
LINC00458-202ENST00000427299 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
LINC00458-202ENST00000427299 NRLP54845 237 aa9.79□□□□□ -0.84
LINC00458-202ENST00000427299 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
LINC00458-202ENST00000427299 VTI1AQ96AJ9 217 aa9.79□□□□□ -0.84
LINC00458-202ENST00000427299 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
LINC00458-202ENST00000427299 DEAF1O75398 565 aaPredicted RBP9.78□□□□□ -0.84
LINC00458-202ENST00000427299 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
LINC00458-202ENST00000427299 NOS3P29474 1203 aa9.77□□□□□ -0.85
LINC00458-202ENST00000427299 LRP8Q14114 963 aa9.77□□□□□ -0.85
LINC00458-202ENST00000427299 FAM200AQ8TCP9 573 aa9.77□□□□□ -0.85
LINC00458-202ENST00000427299 SMG9Q9H0W8 520 aaKnown RBP9.77□□□□□ -0.85
LINC00458-202ENST00000427299 TLR7Q9NYK1 1049 aaKnown RBP9.77□□□□□ -0.85
LINC00458-202ENST00000427299 USP20Q9Y2K6 914 aa9.77□□□□□ -0.85
LINC00458-202ENST00000427299 ARID4AP29374 1257 aaPredicted RBP9.76□□□□□ -0.85
LINC00458-202ENST00000427299 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
LINC00458-202ENST00000427299 IGF2-ASQ6U949 168 aa9.76□□□□□ -0.85
LINC00458-202ENST00000427299 HFE2Q6ZVN8 426 aa9.76□□□□□ -0.85
LINC00458-202ENST00000427299 XYLBO75191 536 aa9.75□□□□□ -0.85
LINC00458-202ENST00000427299 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
LINC00458-202ENST00000427299 TREML1Q86YW5 311 aa9.75□□□□□ -0.85
LINC00458-202ENST00000427299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00458-202ENST00000427299 DLL1O00548 723 aa9.74□□□□□ -0.85
LINC00458-202ENST00000427299 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
LINC00458-202ENST00000427299 EIF2AK2P19525 551 aaKnown RBP9.74□□□□□ -0.85
LINC00458-202ENST00000427299 COX20Q5RI15 118 aa9.74□□□□□ -0.85
LINC00458-202ENST00000427299 RGL4Q8IZJ4 473 aa9.74□□□□□ -0.85
LINC00458-202ENST00000427299 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
LINC00458-202ENST00000427299 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
LINC00458-202ENST00000427299 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
LINC00458-202ENST00000427299 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
LINC00458-202ENST00000427299 KRTAP4-12Q9BQ66 201 aa9.72□□□□□ -0.85
LINC00458-202ENST00000427299 NOVA2Q9UNW9 492 aaKnown RBP9.72□□□□□ -0.85
LINC00458-202ENST00000427299 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 J3QW42 95 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.86
LINC00458-202ENST00000427299 MMP20O60882 483 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 SOX18P35713 384 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 SIK1P57059 783 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 NBPF11Q86T75 865 aa9.71□□□□□ -0.86
LINC00458-202ENST00000427299 PSAPP07602 524 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 RFX1P22670 979 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 OCLNQ16625 522 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 SWI5Q1ZZU3 235 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 CDCA8Q53HL2 280 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
LINC00458-202ENST00000427299 NSUN5Q96P11 429 aaKnown RBP9.7□□□□□ -0.86
LINC00458-202ENST00000427299 LCE3BQ5TA77 95 aa9.69□□□□□ -0.86
LINC00458-202ENST00000427299 DZIP1LQ8IYY4 767 aaKnown RBP9.69□□□□□ -0.86
LINC00458-202ENST00000427299 PRIMPOLQ96LW4 560 aa9.69□□□□□ -0.86
LINC00458-202ENST00000427299 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
LINC00458-202ENST00000427299 TRIP4Q15650 581 aaPredicted RBP9.68□□□□□ -0.86
LINC00458-202ENST00000427299 PRR23CQ6ZRP0 262 aa9.68□□□□□ -0.86
LINC00458-202ENST00000427299 SAP130Q9H0E3 1048 aa9.68□□□□□ -0.86
LINC00458-202ENST00000427299 AKTIPQ9H8T0 292 aa9.68□□□□□ -0.86
LINC00458-202ENST00000427299 SRA1Q9HD15 236 aaKnown RBP9.68□□□□□ -0.86
LINC00458-202ENST00000427299 ZNF777Q9ULD5 760 aaPredicted RBP9.68□□□□□ -0.86
LINC00458-202ENST00000427299 ZMIZ1Q9ULJ6 1067 aa9.68□□□□□ -0.86
LINC00458-202ENST00000427299 PRMT3O60678 531 aa9.67□□□□□ -0.86
LINC00458-202ENST00000427299 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms