RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
HCG18-235ENST00000426882 KIF4BQ2VIQ3 1234 aa22.78■■□□□ 1.24
HCG18-235ENST00000426882 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
HCG18-235ENST00000426882 KCNA6P17658 529 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 ANO6Q4KMQ2 910 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 TMEM132AQ24JP5 1023 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 NPHP3Q7Z494 1330 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 GOLGA6L10A6NI86 522 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 ERLIN2O94905 339 aa22.77■■□□□ 1.24
HCG18-235ENST00000426882 PBRM1Q86U86 1689 aa22.77■■□□□ 1.23
HCG18-235ENST00000426882 CCDC148Q8NFR7 591 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 PAG1Q9NWQ8 432 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 CCDC102AQ96A19 550 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 ZBTB43O43298 467 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 IP6K1Q92551 441 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 TRPM2O94759 1503 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 FAM193AP78312 1265 aa22.76■■□□□ 1.23
HCG18-235ENST00000426882 FKBP15Q5T1M5 1219 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 CASQ1P31415 396 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 RDXP35241 583 aaKnown RBP22.75■■□□□ 1.23
HCG18-235ENST00000426882 SYKP43405 635 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 ALG1Q9BT22 464 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 TSPYL1Q9H0U9 437 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 CBX1P83916 185 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 SPA17Q15506 151 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
HCG18-235ENST00000426882 SEPT11Q9NVA2 429 aaKnown RBP22.75■■□□□ 1.23
HCG18-235ENST00000426882 RNMTO43148 476 aaKnown RBP22.74■■□□□ 1.23
HCG18-235ENST00000426882 CRACR2BQ8N4Y2 399 aaPredicted RBP22.74■■□□□ 1.23
HCG18-235ENST00000426882 KCNG4Q8TDN1 519 aa22.74■■□□□ 1.23
HCG18-235ENST00000426882 TSPY2A6NKD2 308 aa22.74■■□□□ 1.23
HCG18-235ENST00000426882 MRPS27Q92552 414 aaKnown RBP22.74■■□□□ 1.23
HCG18-235ENST00000426882 SLC9C2Q5TAH2 1124 aa22.74■■□□□ 1.23
HCG18-235ENST00000426882 WTAPQ15007 396 aa22.74■■□□□ 1.23
HCG18-235ENST00000426882 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
HCG18-235ENST00000426882 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
HCG18-235ENST00000426882 BICC1Q9H694 974 aaKnown RBP22.73■■□□□ 1.23
HCG18-235ENST00000426882 RAB34Q9BZG1 259 aa22.73■■□□□ 1.23
HCG18-235ENST00000426882 DDX21Q9NR30 783 aaKnown RBP eCLIP22.73■■□□□ 1.23
HCG18-235ENST00000426882 KIF5BP33176 963 aa22.73■■□□□ 1.23
HCG18-235ENST00000426882 TFCP2Q12800 502 aa22.73■■□□□ 1.23
HCG18-235ENST00000426882 CCDC186Q7Z3E2 898 aa22.73■■□□□ 1.23
HCG18-235ENST00000426882 ZKSCAN5Q9Y2L8 839 aa22.73■■□□□ 1.23
HCG18-235ENST00000426882 CPA1P15085 419 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 TAF4BQ92750 862 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 DNAJC25Q9H1X3 360 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 CENPHQ9H3R5 247 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 GBP3Q9H0R5 595 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 TMOD2Q9NZR1 351 aa22.72■■□□□ 1.23
HCG18-235ENST00000426882 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
HCG18-235ENST00000426882 SYT1P21579 422 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 PDE4BQ07343 736 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 SNW1Q13573 536 aaKnown RBP22.71■■□□□ 1.23
HCG18-235ENST00000426882 CCDC152Q4G0S7 254 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 RUFY3Q7L099 469 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 NOLC1Q14978 699 aaKnown RBP eCLIP22.71■■□□□ 1.23
HCG18-235ENST00000426882 PRIMPOLQ96LW4 560 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 PRC1O43663 620 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 CCDC96Q2M329 555 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 KANK3Q6NY19 840 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 CCDC171Q6TFL3 1326 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 RAD50Q92878 1312 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 TMEM266Q2M3C6 531 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 KRT23Q9C075 422 aa22.71■■□□□ 1.23
HCG18-235ENST00000426882 TTC12Q9H892 705 aaPredicted RBP22.71■■□□□ 1.23
HCG18-235ENST00000426882 CACNA2D4Q7Z3S7 1137 aa22.7■■□□□ 1.23
HCG18-235ENST00000426882 IQSEC3Q9UPP2 1182 aaPredicted RBP22.7■■□□□ 1.23
HCG18-235ENST00000426882 CGNQ9P2M7 1197 aaKnown RBP22.7■■□□□ 1.22
HCG18-235ENST00000426882 CHST3Q7LGC8 479 aa22.7■■□□□ 1.22
HCG18-235ENST00000426882 RPGRQ92834 1020 aaKnown RBP22.7■■□□□ 1.22
HCG18-235ENST00000426882 DCAF5Q96JK2 942 aa22.7■■□□□ 1.22
HCG18-235ENST00000426882 TMX1Q9H3N1 280 aa22.7■■□□□ 1.22
HCG18-235ENST00000426882 UBA7P41226 1012 aa22.7■■□□□ 1.22
HCG18-235ENST00000426882 YEATS4O95619 227 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 CCDC150Q8NCX0 1101 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 TSG101Q99816 390 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 KAT14Q9H8E8 782 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 DYNC1I1O14576 645 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 RNF113AO15541 343 aaKnown RBP22.69■■□□□ 1.22
HCG18-235ENST00000426882 LDHCP07864 332 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 CYP7A1P22680 504 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 TYRO3Q06418 890 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 ERICH4A6NGS2 130 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 TCP11L1Q9NUJ3 509 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 APOBRQ0VD83 1088 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
HCG18-235ENST00000426882 SLC4A4Q9Y6R1 1079 aa22.69■■□□□ 1.22
HCG18-235ENST00000426882 MARCKSP29966 332 aaPredicted RBP22.68■■□□□ 1.22
HCG18-235ENST00000426882 CRACR2AQ9BSW2 395 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 CNNM2Q9H8M5 875 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 CEP135Q66GS9 1140 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 DHX32Q7L7V1 743 aaKnown RBP22.68■■□□□ 1.22
HCG18-235ENST00000426882 RTN1Q16799 776 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 SLC4A8Q2Y0W8 1093 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 TMTC2Q8N394 836 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 NGLY1Q96IV0 654 aa22.68■■□□□ 1.22
HCG18-235ENST00000426882 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms