RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 Q6ZNB5 142 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 COL23A1Q86Y22 540 aaPredicted RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 AK7Q96M32 723 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 TEX13AQ9BXU3 409 aaPredicted RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 TFCP2L1Q9NZI6 479 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 COL5A3P25940 1745 aaPredicted RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 TAF1LQ8IZX4 1826 aa7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 RPS6KA4O75676 772 aa7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 HOXB7P09629 217 aa7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 MYL6BP14649 208 aa7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 EIF5P55010 431 aaKnown RBP7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 SRP68Q9UHB9 627 aaKnown RBP7.37□□□□□ -1.23
HERPUD2-204ENST00000426180 TTLL7Q6ZT98 887 aa7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 G2E3Q7L622 706 aa7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 TBC1D2BQ9UPU7 963 aa7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 ZNF330Q9Y3S2 320 aaPredicted RBP7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
HERPUD2-204ENST00000426180 COL15A1P39059 1388 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 MYH14Q7Z406 1995 aaKnown RBP7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 SSFA2P28290 1259 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 IL6STP40189 918 aaPredicted RBP7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 PRSS12P56730 875 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 CCDC30Q5VVM6 783 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 XAGE3Q8WTP9 111 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 SSH1Q8WYL5 1049 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 DDX21Q9NR30 783 aaKnown RBP eCLIP7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 TUBGCP6Q96RT7 1819 aa7.35□□□□□ -1.23
HERPUD2-204ENST00000426180 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 CAMTA2O94983 1202 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 ZBTB7AO95365 584 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 RARSP54136 660 aaKnown RBP7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 AIMP1Q12904 312 aaKnown RBP7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 HLFQ16534 295 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 USPL1Q5W0Q7 1092 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 COPS6Q7L5N1 327 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 SAMD7Q7Z3H4 446 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 SPRYD3Q8NCJ5 442 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 ARXQ96QS3 562 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 DBF4Q9UBU7 674 aaPredicted RBP7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 UBR3Q6ZT12 1888 aa7.34□□□□□ -1.23
HERPUD2-204ENST00000426180 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 SMAPO00193 183 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 BCAR3O75815 825 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 GYS1P13807 737 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 RFC4P35249 363 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 LAPTM4AQ15012 233 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 E2F4Q16254 413 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 DZIP3Q86Y13 1208 aaKnown RBP7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 ZBTB3Q9H5J0 574 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 HYPKQ9NX55 129 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 NARFQ9UHQ1 456 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 CASZ1Q86V15 1759 aa7.33□□□□□ -1.24
HERPUD2-204ENST00000426180 A0A087WZG4 1122 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 GRXCR2A6NFK2 248 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 FLIIQ13045 1269 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 TJAP1Q5JTD0 557 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 FLAD1Q8NFF5 587 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 TATDN2Q93075 761 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 STK31Q9BXU1 1019 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 TNNQ9UQP3 1299 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 ADCY9O60503 1353 aa7.32□□□□□ -1.24
HERPUD2-204ENST00000426180 MAP3K15Q6ZN16 1313 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 F6X3S4 739 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 ZPR1O75312 459 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 C4AP0C0L4 1744 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 HMGB2P26583 209 aaKnown RBP7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 DDR1Q08345 913 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 ALDH1L2Q3SY69 923 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 TBC1D9BQ66K14 1250 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 BICDL1Q6ZP65 573 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 PNMA3Q9UL41 463 aa7.31□□□□□ -1.24
HERPUD2-204ENST00000426180 QSER1Q2KHR3 1735 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 PI4KAP2A4QPH2 592 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 ERVV-1B6SEH8 477 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 GFRA3O60609 400 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 TM4SF1P30408 202 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 NFIXQ14938 502 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 KIF6Q6ZMV9 814 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 PI4KAP1Q8N8J0 262 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 PLBD2Q8NHP8 589 aa7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
HERPUD2-204ENST00000426180 UBN2Q6ZU65 1347 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 SCN7AQ01118 1682 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms