RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 LAMA3Q16787 3333 aa13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
TUBA4A-204ENST00000425551 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
TUBA4A-204ENST00000425551 MIER1Q8N108 512 aa13.09□□□□□ -0.31
TUBA4A-204ENST00000425551 PSMD14O00487 310 aa13.08□□□□□ -0.32
TUBA4A-204ENST00000425551 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
TUBA4A-204ENST00000425551 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
TUBA4A-204ENST00000425551 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 GTF2E1P29083 439 aaPredicted RBP13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 TEFQ10587 303 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
TUBA4A-204ENST00000425551 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 GPR25O00155 361 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 ANP32CO43423 234 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 NTSR2O95665 410 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 C2orf69Q8N8R5 385 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 ABCC4O15439 1325 aa13.06□□□□□ -0.32
TUBA4A-204ENST00000425551 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 MCM10Q7L590 875 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
TUBA4A-204ENST00000425551 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
TUBA4A-204ENST00000425551 H0YGN5 161 aa13.04□□□□□ -0.32
TUBA4A-204ENST00000425551 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
TUBA4A-204ENST00000425551 NUP98P52948 1817 aa13.04□□□□□ -0.32
TUBA4A-204ENST00000425551 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
TUBA4A-204ENST00000425551 SCN9AQ15858 1988 aa13.02□□□□□ -0.32
TUBA4A-204ENST00000425551 H7C1D1 291 aa13.02□□□□□ -0.33
TUBA4A-204ENST00000425551 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
TUBA4A-204ENST00000425551 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
TUBA4A-204ENST00000425551 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
TUBA4A-204ENST00000425551 VCANP13611 3396 aa13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 SNRPA1P09661 255 aaKnown RBP13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 DPP8Q6V1X1 898 aaPredicted RBP13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 MPNDQ8N594 471 aa13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
TUBA4A-204ENST00000425551 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
TUBA4A-204ENST00000425551 WTIPA6NIX2 430 aaPredicted RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 CCER2I3L3R5 266 aa13□□□□□ -0.33
TUBA4A-204ENST00000425551 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 PKN2Q16513 984 aaKnown RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
TUBA4A-204ENST00000425551 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
TUBA4A-204ENST00000425551 POLLQ9UGP5 575 aa13□□□□□ -0.33
TUBA4A-204ENST00000425551 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 MYCP01106 439 aaPredicted RBP12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 ANXA1P04083 346 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 MYL6BP14649 208 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 TNIP1Q15025 636 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
TUBA4A-204ENST00000425551 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 TM4SF4P48230 202 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 PRKG1Q13976 671 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 SCARF1Q14162 830 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 LAMB2P55268 1798 aa12.98□□□□□ -0.33
TUBA4A-204ENST00000425551 SPTBN5Q9NRC6 3674 aaKnown RBP12.97□□□□□ -0.33
TUBA4A-204ENST00000425551 FKTNO75072 461 aa12.97□□□□□ -0.33
TUBA4A-204ENST00000425551 DPF2Q92785 391 aa12.97□□□□□ -0.33
TUBA4A-204ENST00000425551 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
TUBA4A-204ENST00000425551 CDHR2Q9BYE9 1310 aa12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 GPSM2P81274 684 aa12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 PROSER3Q2NL68 480 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms