RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
VPS37A-202ENST00000425020 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
VPS37A-202ENST00000425020 DNA2P51530 1060 aa11.91□□□□□ -0.5
VPS37A-202ENST00000425020 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
VPS37A-202ENST00000425020 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
VPS37A-202ENST00000425020 JAG2Q9Y219 1238 aa11.91□□□□□ -0.5
VPS37A-202ENST00000425020 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
VPS37A-202ENST00000425020 A1BGP04217 495 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 FAM193AP78312 1265 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 HSP90B2PQ58FF3 399 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 SLC12A7Q9Y666 1083 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 METP08581 1390 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
VPS37A-202ENST00000425020 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
VPS37A-202ENST00000425020 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 ZKSCAN3Q9BRR0 538 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 TRIM34Q9BYJ4 488 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
VPS37A-202ENST00000425020 ENOX2Q16206 610 aaKnown RBP11.9□□□□□ -0.51
VPS37A-202ENST00000425020 CCDC47Q96A33 483 aaKnown RBP11.9□□□□□ -0.51
VPS37A-202ENST00000425020 EAF2Q96CJ1 260 aaPredicted RBP11.9□□□□□ -0.51
VPS37A-202ENST00000425020 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
VPS37A-202ENST00000425020 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
VPS37A-202ENST00000425020 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
VPS37A-202ENST00000425020 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 ME3Q16798 604 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
VPS37A-202ENST00000425020 PAG1Q9NWQ8 432 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 SLC27A2O14975 620 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 BRD1O95696 1058 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 AKAP2Q9Y2D5 859 aa11.89□□□□□ -0.51
VPS37A-202ENST00000425020 CDKL5O76039 1030 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
VPS37A-202ENST00000425020 ACSBG1Q96GR2 724 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 AFMP43652 599 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 USP5P45974 858 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 HSPA2P54652 639 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 ZSCAN25Q6NSZ9 544 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 MIGA1Q8NAN2 632 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
VPS37A-202ENST00000425020 STX1AQ16623 288 aa11.88□□□□□ -0.51
VPS37A-202ENST00000425020 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
VPS37A-202ENST00000425020 EDC4Q6P2E9 1401 aaKnown RBP11.88□□□□□ -0.51
VPS37A-202ENST00000425020 RAD50Q92878 1312 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ERCC6L2Q5T890 1561 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
VPS37A-202ENST00000425020 LIG1P18858 919 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
VPS37A-202ENST00000425020 SPECC1Q5M775 1068 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 TLR7Q9NYK1 1049 aaKnown RBP11.87□□□□□ -0.51
VPS37A-202ENST00000425020 PRC1O43663 620 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 HSPA4P34932 840 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ZNF445P59923 1031 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 IP6K1Q92551 441 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ARHGAP29Q52LW3 1261 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 CEP135Q66GS9 1140 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
VPS37A-202ENST00000425020 FSD2A1L4K1 749 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 LRMPQ12912 555 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
VPS37A-202ENST00000425020 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 NPHP3Q7Z494 1330 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 SMTNL1A8MU46 457 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 DYNC1I1O14576 645 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 TXLNAP40222 546 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
VPS37A-202ENST00000425020 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 MCM5P33992 734 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 SYKP43405 635 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 STX17P56962 302 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
VPS37A-202ENST00000425020 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 UVSSAQ2YD98 709 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
VPS37A-202ENST00000425020 ABCA8O94911 1581 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 SNW1Q13573 536 aaKnown RBP11.85□□□□□ -0.51
VPS37A-202ENST00000425020 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
VPS37A-202ENST00000425020 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
VPS37A-202ENST00000425020 LARGE1O95461 756 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms