RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 HS1BP3Q53T59 392 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 SAMD15Q9P1V8 674 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.2
LAMA4-207ENST00000424408 ZNF569Q5MCW4 686 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-207ENST00000424408 RNF41Q9H4P4 317 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-207ENST00000424408 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 LZTFL1Q9NQ48 299 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 CCDC63Q8NA47 563 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 UBA7P41226 1012 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
LAMA4-207ENST00000424408 LACTBP83111 547 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 TYRO3Q06418 890 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 HAND2P61296 217 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 CAVIN4Q5BKX8 364 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 TMEM110-MUSTN1A8MSY1 372 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 TTC16Q8NEE8 873 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 CFTRP13569 1480 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 F13A1P00488 732 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 DNM1Q05193 864 aaKnown RBP13.78□□□□□ -0.2
LAMA4-207ENST00000424408 KCNK9Q9NPC2 374 aa13.78□□□□□ -0.2
LAMA4-207ENST00000424408 A0A1B0GUA9 196 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 PSMC4P43686 418 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.2
LAMA4-207ENST00000424408 KRT83P78385 493 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 PLVAPQ9BX97 442 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 FAM160A1Q05DH4 1040 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 SETDB1Q15047 1291 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 MIPOL1Q8TD10 442 aa13.77□□□□□ -0.2
LAMA4-207ENST00000424408 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 AFAP1L1Q8TED9 768 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 CHMP4BP1P59074 171 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 STXBP4Q6ZWJ1 553 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 FERMT1Q9BQL6 677 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 VGLL3A8MV65 326 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 STAT6P42226 847 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 DZIP1Q86YF9 867 aaKnown RBP13.77□□□□□ -0.21
LAMA4-207ENST00000424408 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 STIM2Q9P246 746 aa13.77□□□□□ -0.21
LAMA4-207ENST00000424408 KRT86O43790 486 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 TPD52P55327 224 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-207ENST00000424408 ABCC11Q96J66 1382 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 TUBB4BP68371 445 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 ATP11AP98196 1134 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 NUCB1Q02818 461 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 RPGRIP1LQ68CZ1 1315 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-207ENST00000424408 LMOD1P29536 600 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-207ENST00000424408 PPFIBP2Q8ND30 876 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 NCOA7Q8NI08 942 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 RAB3IL1Q8TBN0 382 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 KIF5AQ12840 1032 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
LAMA4-207ENST00000424408 TLDC2A0PJX2 215 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 UBLCP1Q8WVY7 318 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 SLC5A1P13866 664 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 MARCKSP29966 332 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 PRPHP41219 470 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 EVCP57679 992 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 ZWINTO95229 277 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 GJC1P36383 396 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 ARFGAP2Q8N6H7 521 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 STMN2Q93045 179 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 RRAGDQ9NQL2 400 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 CWC25Q9NXE8 425 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-207ENST00000424408 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
LAMA4-207ENST00000424408 ARID5AQ03989 594 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 SPAG1Q07617 926 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 LMBR1Q8WVP7 490 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 PTPRCP08575 1304 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 RPUSD2Q8IZ73 545 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms