RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 CILP2Q8IUL8 1156 aa3.29□□□□□ -1.88
PMS1-210ENST00000424307 SERTAD1Q9UHV2 236 aa3.29□□□□□ -1.88
PMS1-210ENST00000424307 F8W735 103 aaPredicted RBP3.28□□□□□ -1.88
PMS1-210ENST00000424307 GRNP28799 593 aaKnown RBP3.28□□□□□ -1.88
PMS1-210ENST00000424307 PSMA6P60900 246 aaKnown RBP3.28□□□□□ -1.88
PMS1-210ENST00000424307 CCINQ13939 588 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 PNMA5Q96PV4 448 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.28□□□□□ -1.88
PMS1-210ENST00000424307 EML3Q32P44 896 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 TRIM50Q86XT4 487 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 PLPP7Q8NBV4 271 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 ZDHHC1Q8WTX9 485 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 BHMTQ93088 406 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 DBNDD2Q9BQY9 259 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 STOML1Q9UBI4 398 aa3.28□□□□□ -1.88
PMS1-210ENST00000424307 PRR19A6NJB7 356 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 TYRO3Q06418 890 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 ZNF232Q9UNY5 417 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 RTN1Q16799 776 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 RNF43Q68DV7 783 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 TRPM4Q8TD43 1214 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 PCDHGA11Q9Y5H2 935 aa3.27□□□□□ -1.89
PMS1-210ENST00000424307 SFI1A8K8P3 1242 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 SUV39H1O43463 412 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 CTSWP56202 376 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 GRIK5Q16478 980 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 ELMSAN1Q6PJG2 1045 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 SLC9A9Q8IVB4 645 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 SUSD3Q96L08 255 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 GSX2Q9BZM3 304 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 ZNF358Q9NW07 568 aa3.26□□□□□ -1.89
PMS1-210ENST00000424307 HOXD8P13378 290 aaPredicted RBP3.25□□□□□ -1.89
PMS1-210ENST00000424307 EPHA4P54764 986 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 CLEC10AQ8IUN9 316 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 AGBL5Q8NDL9 886 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 FAM84AQ96KN4 292 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 TMPRSS5Q9H3S3 457 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 HIF3AQ9Y2N7 669 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 NRLP54845 237 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 GPLD1P80108 840 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 NFIAQ12857 509 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 NUDT8Q8WV74 236 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 SNRKQ9NRH2 765 aa3.25□□□□□ -1.89
PMS1-210ENST00000424307 ATP1A2P50993 1020 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 SEMA3FQ13275 785 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 BTLAQ7Z6A9 289 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 FAM35AQ86V20 835 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 C1QL4Q86Z23 238 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 MTMR14Q8NCE2 650 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 RBSNQ9H1K0 784 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 PRNPP04156 253 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 CFPP27918 469 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 TBC1D8BQ0IIM8 1120 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 TSGA10IPQ3SY00 556 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 LCNL1Q6ZST4 164 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 LPIN3Q9BQK8 851 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 LMCD1Q9NZU5 365 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 USP3Q9Y6I4 520 aa3.24□□□□□ -1.89
PMS1-210ENST00000424307 RAP1GAPP47736 663 aa3.23□□□□□ -1.89
PMS1-210ENST00000424307 GTF2IP78347 998 aa3.23□□□□□ -1.89
PMS1-210ENST00000424307 VSIG10LQ86VR7 867 aa3.23□□□□□ -1.89
PMS1-210ENST00000424307 PPP1R16BQ96T49 567 aa3.23□□□□□ -1.89
PMS1-210ENST00000424307 PHACTR1Q9C0D0 580 aa3.23□□□□□ -1.89
PMS1-210ENST00000424307 TGFBR3LH3BV60 316 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 STAU1O95793 577 aaKnown RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 FAM83CQ9BQN1 747 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 EIF4EBP3O60516 100 aaPredicted RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 DEAF1O75398 565 aaPredicted RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 PERM1Q5SV97 790 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 TP53INP2Q8IXH6 220 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 TMEM40Q8WWA1 233 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 RELTQ969Z4 430 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 FAM46AQ96IP4 442 aaKnown RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 PARP3Q9Y6F1 533 aa3.22□□□□□ -1.89
PMS1-210ENST00000424307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.22□□□□□ -1.89
PMS1-210ENST00000424307 PAPLNO95428 1278 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 NFKB1P19838 968 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 NAGPAQ9UK23 515 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 EGFRP00533 1210 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 ZSCAN22P10073 491 aaPredicted RBP3.21□□□□□ -1.9
PMS1-210ENST00000424307 CPB1P15086 417 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 GLB1P16278 677 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 DHX32Q7L7V1 743 aaKnown RBP3.21□□□□□ -1.9
PMS1-210ENST00000424307 PLEKHM2Q8IWE5 1019 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 WWC1Q8IX03 1113 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 LRRC56Q8IYG6 542 aaPredicted RBP3.21□□□□□ -1.9
PMS1-210ENST00000424307 C7orf69Q9H7B7 122 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 ATG3Q9NT62 314 aa3.21□□□□□ -1.9
PMS1-210ENST00000424307 RBM19Q9Y4C8 960 aaKnown RBP3.21□□□□□ -1.9
PMS1-210ENST00000424307 PSME1Q06323 249 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 ANKRD34AQ69YU3 496 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 RAB44Q7Z6P3 723 aaPredicted RBP3.2□□□□□ -1.9
PMS1-210ENST00000424307 AMIGO3Q86WK7 504 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.2□□□□□ -1.9
PMS1-210ENST00000424307 IGFLR1Q9H665 355 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 TLR7Q9NYK1 1049 aaKnown RBP3.2□□□□□ -1.9
PMS1-210ENST00000424307 PIM2Q9P1W9 311 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 TBC1D2BQ9UPU7 963 aa3.2□□□□□ -1.9
PMS1-210ENST00000424307 SOX18P35713 384 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 249.3 ms