RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
MSH5-206ENST00000423982 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
MSH5-206ENST00000423982 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
MSH5-206ENST00000423982 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.337e-15■■■■□ 25.6
MSH5-206ENST00000423982 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
MSH5-206ENST00000423982 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
MSH5-206ENST00000423982 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
MSH5-206ENST00000423982 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
MSH5-206ENST00000423982 RIOK3O14730 519 aaKnown RBP17.1■□□□□ 0.33
MSH5-206ENST00000423982 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
MSH5-206ENST00000423982 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
MSH5-206ENST00000423982 AOX1Q06278 1338 aa17.09■□□□□ 0.33
MSH5-206ENST00000423982 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.33
MSH5-206ENST00000423982 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.33
MSH5-206ENST00000423982 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.33
MSH5-206ENST00000423982 VPS72Q15906 364 aa17.08■□□□□ 0.32
MSH5-206ENST00000423982 ME3Q16798 604 aa17.08■□□□□ 0.32
MSH5-206ENST00000423982 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
MSH5-206ENST00000423982 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
MSH5-206ENST00000423982 LIG1P18858 919 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 PTGS1P23219 599 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 POLA2Q14181 598 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 LUZP1Q86V48 1076 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
MSH5-206ENST00000423982 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 TTC6Q86TZ1 520 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 ASAP1Q9ULH1 1129 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
MSH5-206ENST00000423982 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
MSH5-206ENST00000423982 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
MSH5-206ENST00000423982 DMTNQ08495 405 aa17.06■□□□□ 0.32
MSH5-206ENST00000423982 LRMPQ12912 555 aa17.06■□□□□ 0.32
MSH5-206ENST00000423982 IGSF3O75054 1194 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.327e-8■■■■■ 27.4
MSH5-206ENST00000423982 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 PIGBQ92521 554 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
MSH5-206ENST00000423982 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
MSH5-206ENST00000423982 PROSER3Q2NL68 480 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 ATP6V1DQ9Y5K8 247 aa17.05■□□□□ 0.32
MSH5-206ENST00000423982 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 NWD2Q9ULI1 1742 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 MYL6BP14649 208 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 MRVI1Q9Y6F6 885 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
MSH5-206ENST00000423982 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
MSH5-206ENST00000423982 KCNQ2O43526 872 aa17.03■□□□□ 0.32
MSH5-206ENST00000423982 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
MSH5-206ENST00000423982 PDCL2Q8N4E4 241 aa17.03■□□□□ 0.32
MSH5-206ENST00000423982 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
MSH5-206ENST00000423982 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
MSH5-206ENST00000423982 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
MSH5-206ENST00000423982 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
MSH5-206ENST00000423982 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.32
MSH5-206ENST00000423982 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
MSH5-206ENST00000423982 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
MSH5-206ENST00000423982 TYRO3Q06418 890 aa17.02■□□□□ 0.31
MSH5-206ENST00000423982 NAA30Q147X3 362 aaPredicted RBP17.02■□□□□ 0.31
MSH5-206ENST00000423982 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
MSH5-206ENST00000423982 CCDC186Q7Z3E2 898 aa17.02■□□□□ 0.31
MSH5-206ENST00000423982 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.31
MSH5-206ENST00000423982 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.31
MSH5-206ENST00000423982 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.31
MSH5-206ENST00000423982 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.31
MSH5-206ENST00000423982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
MSH5-206ENST00000423982 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
MSH5-206ENST00000423982 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
MSH5-206ENST00000423982 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
MSH5-206ENST00000423982 DACT1Q9NYF0 836 aa17.01■□□□□ 0.31
MSH5-206ENST00000423982 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
MSH5-206ENST00000423982 ANO6Q4KMQ2 910 aa17■□□□□ 0.31
MSH5-206ENST00000423982 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
MSH5-206ENST00000423982 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
MSH5-206ENST00000423982 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
MSH5-206ENST00000423982 STK3Q13188 491 aa17■□□□□ 0.31
MSH5-206ENST00000423982 MAP3K11Q16584 847 aa17■□□□□ 0.31
MSH5-206ENST00000423982 BEND3Q5T5X7 828 aa17■□□□□ 0.31
MSH5-206ENST00000423982 FAM200AQ8TCP9 573 aa17■□□□□ 0.31
MSH5-206ENST00000423982 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
MSH5-206ENST00000423982 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
MSH5-206ENST00000423982 KCNJ4P48050 445 aa16.99■□□□□ 0.31
MSH5-206ENST00000423982 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
MSH5-206ENST00000423982 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms