RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 ST5P78524 1137 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 FAM161AQ3B820 660 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 B4GALNT3Q6L9W6 998 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 NLRP3Q96P20 1036 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 BRIP1Q9BX63 1249 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 SEC31BQ9NQW1 1179 aa15.78■□□□□ 0.12
RPUSD3-203ENST00000423108 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.12
RPUSD3-203ENST00000423108 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.12
RPUSD3-203ENST00000423108 KLHDC4Q8TBB5 520 aa15.77■□□□□ 0.12
RPUSD3-203ENST00000423108 PA2G4Q9UQ80 394 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-203ENST00000423108 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
RPUSD3-203ENST00000423108 HSP90B1P14625 803 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-203ENST00000423108 POLD1P28340 1107 aa15.76■□□□□ 0.11
RPUSD3-203ENST00000423108 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
RPUSD3-203ENST00000423108 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-203ENST00000423108 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
RPUSD3-203ENST00000423108 ITGA6P23229 1130 aa15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 PTPN12Q05209 780 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 CRY2Q49AN0 593 aa15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 CCDC152Q4G0S7 254 aa15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 RWDD1Q9H446 243 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 SPON1Q9HCB6 807 aa15.75■□□□□ 0.11
RPUSD3-203ENST00000423108 TNRC6CQ9HCJ0 1690 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-203ENST00000423108 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
RPUSD3-203ENST00000423108 PUS3Q9BZE2 481 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-203ENST00000423108 DCTPP1Q9H773 170 aa15.74■□□□□ 0.11
RPUSD3-203ENST00000423108 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
RPUSD3-203ENST00000423108 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 HMMRO75330 724 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 CHRNA5P30532 468 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 COPRSQ9NQ92 184 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 COL4A1P02462 1669 aa15.73■□□□□ 0.11
RPUSD3-203ENST00000423108 KDM2BQ8NHM5 1336 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 ANKRD31Q8N7Z5 1873 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 SRGNP10124 158 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 HOXA10P31260 410 aaPredicted RBP15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 PDE6BP35913 854 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 CCDC57Q2TAC2 916 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 EXOC6BQ9Y2D4 811 aa15.72■□□□□ 0.11
RPUSD3-203ENST00000423108 SURF6O75683 361 aaKnown RBP15.71■□□□□ 0.11
RPUSD3-203ENST00000423108 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
RPUSD3-203ENST00000423108 ATG9AQ7Z3C6 839 aa15.71■□□□□ 0.11
RPUSD3-203ENST00000423108 SIL1Q9H173 461 aa15.71■□□□□ 0.11
RPUSD3-203ENST00000423108 LAMB2P55268 1798 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 NPR1P16066 1061 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 DPEP1P16444 411 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 KCNA3P22001 575 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 DDX46Q7L014 1031 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 SMC5Q8IY18 1101 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 RBM17Q96I25 401 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-203ENST00000423108 H0YIN7 160 aa15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 EYA2O00167 538 aa15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 GRAPQ13588 217 aa15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 RPGRQ92834 1020 aaKnown RBP15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 MASTLQ96GX5 879 aa15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 RIPOR2Q9Y4F9 1068 aa15.69■□□□□ 0.1
RPUSD3-203ENST00000423108 APBB1O00213 710 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 SASH1O94885 1247 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 TAF7LQ5H9L4 462 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 STYK1Q6J9G0 422 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 ANKRD18AQ8IVF6 992 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 MYH3P11055 1940 aa15.68■□□□□ 0.1
RPUSD3-203ENST00000423108 TAF1P21675 1872 aa15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 SMARCA5O60264 1052 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 CIAO1O76071 339 aa15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 LDHAL6AQ6ZMR3 332 aa15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 CDC5LQ99459 802 aaKnown RBP15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
RPUSD3-203ENST00000423108 IGHMBP2P38935 993 aaKnown RBP15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 TGFB2P61812 414 aa15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 CENPQQ7L2Z9 268 aaPredicted RBP15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 GCC1Q96CN9 775 aa15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 BSDC1Q9NW68 430 aaPredicted RBP15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
RPUSD3-203ENST00000423108 RAB11FIP3O75154 756 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 BBOX1O75936 387 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 TFCP2Q12800 502 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
RPUSD3-203ENST00000423108 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms