RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 CCZ1P86791 482 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-204ENST00000422869 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-204ENST00000422869 ADAMTS13Q76LX8 1427 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 MED23Q9ULK4 1368 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 NEMFO60524 1076 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 SKILP12757 684 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 PTPN14Q15678 1187 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 FBXO38Q6PIJ6 1188 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 AACSQ86V21 672 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 MED1Q15648 1581 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-204ENST00000422869 JCADQ9P266 1359 aa14.96□□□□□ -0.01
CTCFL-204ENST00000422869 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
CTCFL-204ENST00000422869 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.02
CTCFL-204ENST00000422869 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 GOLGA6L19H0YKK7 550 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 ANXA1P04083 346 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
CTCFL-204ENST00000422869 USP16Q9Y5T5 823 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 HIP1O00291 1037 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 ELF2Q15723 593 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 DDX11Q96FC9 970 aa14.95□□□□□ -0.02
CTCFL-204ENST00000422869 HOXC9P31274 260 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 ERC1Q8IUD2 1116 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 GTF3C6Q969F1 213 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 CCDC69A6NI79 296 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
CTCFL-204ENST00000422869 DHX40Q8IX18 779 aaKnown RBP14.94□□□□□ -0.02
CTCFL-204ENST00000422869 BRF1Q92994 677 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 ERO1AQ96HE7 468 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 CCAR2Q8N163 923 aaKnown RBP14.94□□□□□ -0.02
CTCFL-204ENST00000422869 EAF2Q96CJ1 260 aaPredicted RBP14.94□□□□□ -0.02
CTCFL-204ENST00000422869 KCND1Q9NSA2 647 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
CTCFL-204ENST00000422869 SASH1O94885 1247 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 STX1AQ16623 288 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 TSGA10IPQ3SY00 556 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 SLFNL1Q499Z3 407 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 ZNF446Q9NWS9 450 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
CTCFL-204ENST00000422869 TLR7Q9NYK1 1049 aaKnown RBP14.93□□□□□ -0.02
CTCFL-204ENST00000422869 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
CTCFL-204ENST00000422869 MLECQ14165 292 aa14.93□□□□□ -0.02
CTCFL-204ENST00000422869 A0A087WWV3 80 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 HOXB7P09629 217 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 FILIP1Q7Z7B0 1213 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 GOLPH3LQ9H4A5 285 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 TMEM51Q9NW97 253 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 KCNQ3O43525 872 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 SNW1Q13573 536 aaKnown RBP14.92□□□□□ -0.02
CTCFL-204ENST00000422869 CCDC8Q9H0W5 538 aaPredicted RBP14.92□□□□□ -0.02
CTCFL-204ENST00000422869 ST7Q9NRC1 585 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
CTCFL-204ENST00000422869 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 CFAP45Q9UL16 551 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 COL15A1P39059 1388 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 TMEM2Q9UHN6 1383 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 SLU7O95391 586 aaKnown RBP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 CEBPZQ03701 1054 aaKnown RBP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 FTOQ9C0B1 505 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 ZBTB22O15209 634 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 CTAGE5O15320 804 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 BOLA2Q9H3K6 86 aa14.91□□□□□ -0.02
CTCFL-204ENST00000422869 C9orf78Q9NZ63 289 aaPredicted RBP14.91□□□□□ -0.02
CTCFL-204ENST00000422869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-204ENST00000422869 TAF5LO75529 589 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 USPL1Q5W0Q7 1092 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 CCAR1Q8IX12 1150 aaKnown RBP14.9□□□□□ -0.02
CTCFL-204ENST00000422869 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-204ENST00000422869 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 MAP3K2Q9Y2U5 619 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 H3BQV1 296 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
CTCFL-204ENST00000422869 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 KAZALD1Q96I82 304 aa14.9□□□□□ -0.02
CTCFL-204ENST00000422869 BECN2A8MW95 431 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 RCOR1Q9UKL0 485 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 NLRP6P59044 892 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 NGDNQ8NEJ9 315 aaKnown RBP14.89□□□□□ -0.03
CTCFL-204ENST00000422869 ENGASEQ8NFI3 743 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 L2HGDHQ9H9P8 463 aa14.89□□□□□ -0.03
CTCFL-204ENST00000422869 H2AFXP16104 143 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-204ENST00000422869 LAMA4Q16363 1823 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 CCDC66A2RUB6 948 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 SCRN1Q12765 414 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-204ENST00000422869 Q6ZUG5 572 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 SMARCC2Q8TAQ2 1214 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 AOPEPQ8N6M6 819 aa14.88□□□□□ -0.03
CTCFL-204ENST00000422869 SUCLG2Q96I99 432 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms