RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 RASA3Q14644 834 aa15.46■□□□□ 0.06
COL20A1-203ENST00000422202 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.06
COL20A1-203ENST00000422202 NBPF5PQ86XG9 351 aaPredicted RBP15.46■□□□□ 0.06
COL20A1-203ENST00000422202 NBPF4Q96M43 638 aa15.46■□□□□ 0.06
COL20A1-203ENST00000422202 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.06
COL20A1-203ENST00000422202 LDHCP07864 332 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 CFAP157Q5JU67 520 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-203ENST00000422202 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 AFMP43652 599 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
COL20A1-203ENST00000422202 SCAND2PQ9GZW5 306 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-203ENST00000422202 KIF5AQ12840 1032 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 TMCO4Q5TGY1 634 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 ZBTB3Q9H5J0 574 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 SP4Q02446 784 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 FAM169AQ9Y6X4 670 aa15.45■□□□□ 0.06
COL20A1-203ENST00000422202 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
COL20A1-203ENST00000422202 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
COL20A1-203ENST00000422202 STX1AQ16623 288 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
COL20A1-203ENST00000422202 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
COL20A1-203ENST00000422202 CUL4BQ13620 913 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 KANK3Q6NY19 840 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 LDHAL6AQ6ZMR3 332 aa15.44■□□□□ 0.06
COL20A1-203ENST00000422202 NSRP1Q9H0G5 558 aaKnown RBP15.44■□□□□ 0.06
COL20A1-203ENST00000422202 ANKRD30BQ9BXX2 1392 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 POTEB2H3BUK9 544 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 PTGS1P23219 599 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 MAP3K2Q9Y2U5 619 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-203ENST00000422202 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 B4DLN1 442 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
COL20A1-203ENST00000422202 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
COL20A1-203ENST00000422202 RNF34Q969K3 372 aa15.43■□□□□ 0.06
COL20A1-203ENST00000422202 SH2B1Q9NRF2 756 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-203ENST00000422202 ANKS4BQ8N8V4 417 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 CCDC114Q96M63 670 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 TFIP11Q9UBB9 837 aaKnown RBP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 ACSBG1Q96GR2 724 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 ATP2A1O14983 1001 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 HSPA4P34932 840 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 AMOTQ4VCS5 1084 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 NUDT16Q96DE0 195 aaKnown RBP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SNRKQ9NRH2 765 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SPDYE3A6NKU9 549 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 HSP90AA4PQ58FG1 418 aa15.42■□□□□ 0.06
COL20A1-203ENST00000422202 SPOUT1Q5T280 376 aaKnown RBP15.42■□□□□ 0.06
COL20A1-203ENST00000422202 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.41■□□□□ 0.06
COL20A1-203ENST00000422202 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 PKNOX2Q96KN3 472 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
COL20A1-203ENST00000422202 TOM1O60784 492 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 RMND1Q9NWS8 449 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 AGTPBP1Q9UPW5 1226 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 ATP5J2-PTCD1G3V325 749 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 NOD1Q9Y239 953 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 CCDC152Q4G0S7 254 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 NAIPQ13075 1403 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 CCDC25Q86WR0 208 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 IL27Q8NEV9 243 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 NACA2Q9H009 215 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
COL20A1-203ENST00000422202 GJB2P29033 226 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 N4BP3O15049 544 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 TRIM7Q9C029 511 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 WTAPQ15007 396 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 GSDMDP57764 484 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
COL20A1-203ENST00000422202 F6X3S4 739 aa15.4■□□□□ 0.06
COL20A1-203ENST00000422202 UAP1Q16222 522 aaPredicted RBP15.4■□□□□ 0.06
COL20A1-203ENST00000422202 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL20A1-203ENST00000422202 KRT5P13647 590 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 ZGPATQ8N5A5 531 aaKnown RBP15.39■□□□□ 0.05
COL20A1-203ENST00000422202 JARID2Q92833 1246 aaPredicted RBP15.39■□□□□ 0.05
COL20A1-203ENST00000422202 KIAA1524Q8TCG1 905 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 AKR1B10O60218 316 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 MSANTD4Q8NCY6 345 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
COL20A1-203ENST00000422202 EHBP1Q8NDI1 1231 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
COL20A1-203ENST00000422202 TBC1D31Q96DN5 1066 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms