RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 ZNF587Q96SQ5 575 aaPredicted RBP8.17□□□□□ -1.1
LINC00397-201ENST00000422074 UBE2OQ9C0C9 1292 aaKnown RBP8.17□□□□□ -1.1
LINC00397-201ENST00000422074 FAM13BQ9NYF5 915 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 KRBA1A5PL33 1030 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 XYLBO75191 536 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 SASH3O75995 380 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 HOXD8P13378 290 aaPredicted RBP8.16□□□□□ -1.1
LINC00397-201ENST00000422074 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
LINC00397-201ENST00000422074 ZBTB42B2RXF5 422 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 ZBTB39O15060 712 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 NID1P14543 1247 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 ZAP70P43403 619 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
LINC00397-201ENST00000422074 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
LINC00397-201ENST00000422074 HELQQ8TDG4 1101 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 PLVAPQ9BX97 442 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
LINC00397-201ENST00000422074 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
LINC00397-201ENST00000422074 RARAP10276 462 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 NRLP54845 237 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 GPLD1P80108 840 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
LINC00397-201ENST00000422074 C8orf86Q6ZUL3 223 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 PIK3R5Q8WYR1 880 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 TTC9Q92623 222 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 FRRS1LQ9P0K9 344 aa8.14□□□□□ -1.11
LINC00397-201ENST00000422074 SUPT5HO00267 1087 aaKnown RBP8.13□□□□□ -1.11
LINC00397-201ENST00000422074 NPR3P17342 541 aa8.13□□□□□ -1.11
LINC00397-201ENST00000422074 SOX18P35713 384 aa8.13□□□□□ -1.11
LINC00397-201ENST00000422074 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
LINC00397-201ENST00000422074 SPDYE3A6NKU9 549 aa8.12□□□□□ -1.11
LINC00397-201ENST00000422074 LILRB5O75023 590 aa8.12□□□□□ -1.11
LINC00397-201ENST00000422074 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
LINC00397-201ENST00000422074 SCNN1AP37088 669 aa8.12□□□□□ -1.11
LINC00397-201ENST00000422074 NLRP13Q86W25 1043 aa8.12□□□□□ -1.11
LINC00397-201ENST00000422074 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
LINC00397-201ENST00000422074 PROCP04070 461 aa8.11□□□□□ -1.11
LINC00397-201ENST00000422074 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
LINC00397-201ENST00000422074 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
LINC00397-201ENST00000422074 PSAPL1Q6NUJ1 521 aa8.11□□□□□ -1.11
LINC00397-201ENST00000422074 GTF3C2Q8WUA4 911 aaPredicted RBP8.11□□□□□ -1.11
LINC00397-201ENST00000422074 MMP20O60882 483 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
LINC00397-201ENST00000422074 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 GRIK5Q16478 980 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 FAM35AQ86V20 835 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 SPOCK3Q9BQ16 436 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
LINC00397-201ENST00000422074 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
LINC00397-201ENST00000422074 CARNS1A5YM72 827 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 UBAP1LF5GYI3 381 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 MSTNO14793 375 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
LINC00397-201ENST00000422074 PLAURQ03405 335 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 PERM1Q5SV97 790 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 GPR152Q8TDT2 470 aa8.09□□□□□ -1.11
LINC00397-201ENST00000422074 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
LINC00397-201ENST00000422074 PSAPP07602 524 aa8.08□□□□□ -1.12
LINC00397-201ENST00000422074 NOM1Q5C9Z4 860 aaKnown RBP8.08□□□□□ -1.12
LINC00397-201ENST00000422074 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
LINC00397-201ENST00000422074 CD163Q86VB7 1156 aa8.08□□□□□ -1.12
LINC00397-201ENST00000422074 OR13H1Q8NG92 308 aa8.08□□□□□ -1.12
LINC00397-201ENST00000422074 NUDT8Q8WV74 236 aa8.08□□□□□ -1.12
LINC00397-201ENST00000422074 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 C1QTNF9BB2RNN3 333 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
LINC00397-201ENST00000422074 CPB1P15086 417 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 SIK1P57059 783 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
LINC00397-201ENST00000422074 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
LINC00397-201ENST00000422074 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
LINC00397-201ENST00000422074 EIF1AXP47813 144 aaKnown RBP8.06□□□□□ -1.12
LINC00397-201ENST00000422074 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
LINC00397-201ENST00000422074 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
LINC00397-201ENST00000422074 PRRT3Q5FWE3 981 aa8.06□□□□□ -1.12
LINC00397-201ENST00000422074 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
LINC00397-201ENST00000422074 ATCAYQ86WG3 371 aa8.06□□□□□ -1.12
LINC00397-201ENST00000422074 MPSTP25325 297 aa8.05□□□□□ -1.12
LINC00397-201ENST00000422074 MZF1P28698 734 aaPredicted RBP8.05□□□□□ -1.12
LINC00397-201ENST00000422074 CHRNA4P43681 627 aa8.05□□□□□ -1.12
LINC00397-201ENST00000422074 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00397-201ENST00000422074 ELMSAN1Q6PJG2 1045 aa8.05□□□□□ -1.12
LINC00397-201ENST00000422074 NUDT16Q96DE0 195 aaKnown RBP8.05□□□□□ -1.12
LINC00397-201ENST00000422074 ARID3AQ99856 593 aa8.05□□□□□ -1.12
LINC00397-201ENST00000422074 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
LINC00397-201ENST00000422074 A0A0A0MRY4 1105 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 FAM13AO94988 1023 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 PDGFAP04085 211 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 PDE4CQ08493 712 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 TRAPPC3LQ5T215 181 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
LINC00397-201ENST00000422074 ABI2Q9NYB9 513 aaPredicted RBP8.04□□□□□ -1.12
LINC00397-201ENST00000422074 KIF4AO95239 1232 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms