RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
TRIM13-204ENST00000420995 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
TRIM13-204ENST00000420995 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
TRIM13-204ENST00000420995 CHAF1AQ13111 956 aaPredicted RBP18.81■□□□□ 0.6
TRIM13-204ENST00000420995 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
TRIM13-204ENST00000420995 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
TRIM13-204ENST00000420995 PGBD1Q96JS3 809 aa18.81■□□□□ 0.6
TRIM13-204ENST00000420995 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 UTYO14607 1347 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 DRC7Q8IY82 874 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 BICD2Q8TD16 824 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 COL15A1P39059 1388 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 TAF5LO75529 589 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
TRIM13-204ENST00000420995 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
TRIM13-204ENST00000420995 CBX1P83916 185 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 TRIM5Q9C035 493 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 DNAJC25Q9H1X3 360 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
TRIM13-204ENST00000420995 PSME1Q06323 249 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 PDIA6Q15084 440 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
TRIM13-204ENST00000420995 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
TRIM13-204ENST00000420995 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 MYL6BP14649 208 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 CCDC129Q6ZRS4 1044 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 RBM43Q6ZSC3 357 aaKnown RBP18.78■□□□□ 0.6
TRIM13-204ENST00000420995 BRF1Q92994 677 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 C16orf45Q96MC5 204 aaPredicted RBP18.78■□□□□ 0.6
TRIM13-204ENST00000420995 DDX21Q9NR30 783 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRIM13-204ENST00000420995 HMG20BQ9P0W2 317 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 JCADQ9P266 1359 aa18.78■□□□□ 0.6
TRIM13-204ENST00000420995 ZNF165P49910 485 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 ZNF75DP51815 510 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 ALDH8A1Q9H2A2 487 aaPredicted RBP18.77■□□□□ 0.6
TRIM13-204ENST00000420995 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 PLA2G4DQ86XP0 818 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
TRIM13-204ENST00000420995 DBNLQ9UJU6 430 aaKnown RBP18.77■□□□□ 0.6
TRIM13-204ENST00000420995 CEBPZQ03701 1054 aaKnown RBP18.76■□□□□ 0.59
TRIM13-204ENST00000420995 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
TRIM13-204ENST00000420995 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
TRIM13-204ENST00000420995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.76■□□□□ 0.59
TRIM13-204ENST00000420995 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
TRIM13-204ENST00000420995 RESTQ13127 1097 aa18.76■□□□□ 0.59
TRIM13-204ENST00000420995 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
TRIM13-204ENST00000420995 PDCL2Q8N4E4 241 aa18.76■□□□□ 0.59
TRIM13-204ENST00000420995 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
TRIM13-204ENST00000420995 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
TRIM13-204ENST00000420995 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 Q6ZUG5 572 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 FOSBP53539 338 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 ORAI2Q96SN7 254 aa18.75■□□□□ 0.59
TRIM13-204ENST00000420995 H3BQV1 296 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 GCP02774 474 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
TRIM13-204ENST00000420995 MYD88Q99836 296 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 ZSCAN20P17040 1043 aaPredicted RBP18.74■□□□□ 0.59
TRIM13-204ENST00000420995 GCKRQ14397 625 aa18.74■□□□□ 0.59
TRIM13-204ENST00000420995 FTOQ9C0B1 505 aaKnown RBP eCLIP18.74■□□□□ 0.599e-12■■■■□ 25.2
TRIM13-204ENST00000420995 CTIFO43310 598 aaKnown RBP18.73■□□□□ 0.59
TRIM13-204ENST00000420995 CYP21A2P08686 494 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 CCDC144BQ3MJ40 725 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 CCDC144CPQ8IYA2 1237 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 XAGE3Q8WTP9 111 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 ANKRD7Q92527 254 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 CLIP2Q9UDT6 1046 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 ZNF609O15014 1411 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
TRIM13-204ENST00000420995 TFCP2Q12800 502 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 KRT32Q14532 448 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
TRIM13-204ENST00000420995 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 SCRN1Q12765 414 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 ARHGEF25Q86VW2 580 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
TRIM13-204ENST00000420995 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
TRIM13-204ENST00000420995 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 U2AF2P26368 475 aaKnown RBP eCLIP18.72■□□□□ 0.599e-7■■□□□ 13.7
TRIM13-204ENST00000420995 TNNI3KQ59H18 835 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 COPS6Q7L5N1 327 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 FPGT-TNNI3KV9GXZ4 949 aa18.72■□□□□ 0.59
TRIM13-204ENST00000420995 A0A087WWV3 80 aa18.71■□□□□ 0.59
TRIM13-204ENST00000420995 ATP5JP18859 108 aa18.71■□□□□ 0.59
TRIM13-204ENST00000420995 C11orf57Q6ZUT1 292 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms