RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 AOC3Q16853 763 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 GIGYF2Q6Y7W6 1299 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 SAPCD2Q86UD0 394 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 RRP7AQ9Y3A4 280 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 CXCL9Q07325 125 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 GRM1Q13255 1194 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
TNFAIP3-202ENST00000420009 CCDC85CA6NKD9 419 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 CA12O43570 354 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 AOC2O75106 756 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 SLC10A5Q5PT55 438 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 PGAP2Q9UHJ9 254 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 ABCC4O15439 1325 aa13.52□□□□□ -0.25
TNFAIP3-202ENST00000420009 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP3-202ENST00000420009 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
TNFAIP3-202ENST00000420009 PDIA6Q15084 440 aa13.5□□□□□ -0.25
TNFAIP3-202ENST00000420009 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
TNFAIP3-202ENST00000420009 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
TNFAIP3-202ENST00000420009 LAMB2P55268 1798 aa13.5□□□□□ -0.25
TNFAIP3-202ENST00000420009 HIRAP54198 1017 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP3-202ENST00000420009 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
TNFAIP3-202ENST00000420009 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP3-202ENST00000420009 LRRC37AA6NMS7 1700 aa13.49□□□□□ -0.25
TNFAIP3-202ENST00000420009 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 BBOX1O75936 387 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 NEFMP07197 916 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 SP8Q8IXZ3 490 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
TNFAIP3-202ENST00000420009 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
TNFAIP3-202ENST00000420009 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 RAD17O75943 681 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 NOGQ13253 232 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 TNIP1Q15025 636 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 MPNDQ8N594 471 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
TNFAIP3-202ENST00000420009 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 GRAPQ13588 217 aa13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 CNOT7Q9UIV1 285 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
TNFAIP3-202ENST00000420009 ANXA1P04083 346 aa13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 TMC4Q7Z404 712 aa13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 MICALL2Q8IY33 904 aa13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
TNFAIP3-202ENST00000420009 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 EIF2S2P20042 333 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 HUNKP57058 714 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 DGKZQ13574 1117 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 DPF2Q92785 391 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 TNRC18O15417 2968 aaPredicted RBP13.43□□□□□ -0.26
TNFAIP3-202ENST00000420009 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 FAM155AB1AL88 458 aaPredicted RBP13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 H7C1D1 291 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 GABBR2O75899 941 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 USP48Q86UV5 1035 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 TRMT112Q9UI30 125 aaKnown RBP13.42□□□□□ -0.26
TNFAIP3-202ENST00000420009 COL4A1P02462 1669 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 EGFRP00533 1210 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 SAMD7Q7Z3H4 446 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 SAGE1Q9NXZ1 904 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 TAF1P21675 1872 aa13.41□□□□□ -0.26
TNFAIP3-202ENST00000420009 PSMD14O00487 310 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms