RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 NTSR2O95665 410 aa14.11□□□□□ -0.15
RAPGEF1-205ENST00000419442 DPF2Q92785 391 aa14.11□□□□□ -0.15
RAPGEF1-205ENST00000419442 RBBP6Q7Z6E9 1792 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-205ENST00000419442 KDM3BQ7LBC6 1761 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 YDJCA8MPS7 323 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 MICALL2Q8IY33 904 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 PHACTR3Q96KR7 559 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 TMX4Q9H1E5 349 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 ABCC4O15439 1325 aa14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
RAPGEF1-205ENST00000419442 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 EIF4G2P78344 907 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 NOM1Q5C9Z4 860 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 SLC10A5Q5PT55 438 aa14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 SP8Q8IXZ3 490 aa14.09□□□□□ -0.15
RAPGEF1-205ENST00000419442 ADM5C9JUS6 153 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 EGFRP00533 1210 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 GPTP24298 496 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 TTLL7Q6ZT98 887 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 SAMD7Q7Z3H4 446 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 RASAL3Q86YV0 1011 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 MPNDQ8N594 471 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 TAF1P21675 1872 aa14.08□□□□□ -0.16
RAPGEF1-205ENST00000419442 BBOX1O75936 387 aa14.07□□□□□ -0.16
RAPGEF1-205ENST00000419442 FBXO46Q6PJ61 603 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-205ENST00000419442 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-205ENST00000419442 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
RAPGEF1-205ENST00000419442 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 PRKAR2BP31323 418 aa14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 FXR1P51114 621 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 TBC1D10BQ4KMP7 808 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 GIGYF2Q6Y7W6 1299 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 KIF6Q6ZMV9 814 aa14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-205ENST00000419442 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-205ENST00000419442 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
RAPGEF1-205ENST00000419442 MCM10Q7L590 875 aa14.05□□□□□ -0.16
RAPGEF1-205ENST00000419442 PPP1R42Q7Z4L9 355 aa14.05□□□□□ -0.16
RAPGEF1-205ENST00000419442 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
RAPGEF1-205ENST00000419442 SCN9AQ15858 1988 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 PSMD14O00487 310 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 FKBP1BP68106 108 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 NGEFQ8N5V2 710 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 CDCA5Q96FF9 252 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 PSME4Q14997 1843 aa14.04□□□□□ -0.16
RAPGEF1-205ENST00000419442 TAF7Q15545 349 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-205ENST00000419442 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-205ENST00000419442 ZNF609O15014 1411 aa14.03□□□□□ -0.16
RAPGEF1-205ENST00000419442 DLG5Q8TDM6 1919 aa14.02□□□□□ -0.16
RAPGEF1-205ENST00000419442 RTL9Q8NET4 1388 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 GPR25O00155 361 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 TBC1D8O95759 1140 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 GRAPQ13588 217 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 GGA3Q9NZ52 723 aa14.02□□□□□ -0.17
RAPGEF1-205ENST00000419442 ERBB4Q15303 1308 aa14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 TM4SF4P48230 202 aa14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 KIF4BQ2VIQ3 1234 aa14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-205ENST00000419442 ASTN2O75129 1339 aaPredicted RBP14□□□□□ -0.17
RAPGEF1-205ENST00000419442 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
RAPGEF1-205ENST00000419442 RBM26Q5T8P6 1007 aaKnown RBP14□□□□□ -0.17
RAPGEF1-205ENST00000419442 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
RAPGEF1-205ENST00000419442 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
RAPGEF1-205ENST00000419442 LAMB1P07942 1786 aa14□□□□□ -0.17
RAPGEF1-205ENST00000419442 MYL6BP14649 208 aa13.99□□□□□ -0.17
RAPGEF1-205ENST00000419442 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
RAPGEF1-205ENST00000419442 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-205ENST00000419442 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-205ENST00000419442 FKTNO75072 461 aa13.98□□□□□ -0.17
RAPGEF1-205ENST00000419442 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-205ENST00000419442 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-205ENST00000419442 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
RAPGEF1-205ENST00000419442 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 ECE2O60344 883 aa13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 VIL1P09327 827 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 ZNF280AP59817 542 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 KCNQ5Q9NR82 932 aa13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 COL4A1P02462 1669 aa13.97□□□□□ -0.17
RAPGEF1-205ENST00000419442 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-205ENST00000419442 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-205ENST00000419442 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
RAPGEF1-205ENST00000419442 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
RAPGEF1-205ENST00000419442 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms