RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 AKAP11Q9UKA4 1901 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 FAM155AB1AL88 458 aaPredicted RBP23.64■■□□□ 1.37
VCP-202ENST00000417448 RAD17O75943 681 aa23.64■■□□□ 1.37
VCP-202ENST00000417448 HUNKP57058 714 aa23.64■■□□□ 1.37
VCP-202ENST00000417448 TAF1P21675 1872 aa23.64■■□□□ 1.37
VCP-202ENST00000417448 ABCC4O15439 1325 aa23.63■■□□□ 1.37
VCP-202ENST00000417448 KIF6Q6ZMV9 814 aa23.63■■□□□ 1.37
VCP-202ENST00000417448 RRP7AQ9Y3A4 280 aaKnown RBP23.63■■□□□ 1.37
VCP-202ENST00000417448 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
VCP-202ENST00000417448 DUOX1Q9NRD9 1551 aa23.62■■□□□ 1.37
VCP-202ENST00000417448 TAF7Q15545 349 aaPredicted RBP23.62■■□□□ 1.37
VCP-202ENST00000417448 USP48Q86UV5 1035 aa23.62■■□□□ 1.37
VCP-202ENST00000417448 BCL2L13Q9BXK5 485 aa23.62■■□□□ 1.37
VCP-202ENST00000417448 MYL6BP14649 208 aa23.61■■□□□ 1.37
VCP-202ENST00000417448 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
VCP-202ENST00000417448 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
VCP-202ENST00000417448 YDJCA8MPS7 323 aa23.6■■□□□ 1.37
VCP-202ENST00000417448 SUPT20HQ8NEM7 779 aa23.6■■□□□ 1.37
VCP-202ENST00000417448 SAGE1Q9NXZ1 904 aa23.6■■□□□ 1.37
VCP-202ENST00000417448 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
VCP-202ENST00000417448 PRPF38BQ5VTL8 546 aaKnown RBP23.59■■□□□ 1.37
VCP-202ENST00000417448 RGMBQ6NW40 437 aa23.59■■□□□ 1.37
VCP-202ENST00000417448 DPP8Q6V1X1 898 aaPredicted RBP23.59■■□□□ 1.37
VCP-202ENST00000417448 CCDC146Q8IYE0 955 aa23.59■■□□□ 1.37
VCP-202ENST00000417448 NLRP3Q96P20 1036 aa23.59■■□□□ 1.37
VCP-202ENST00000417448 GIGYF2Q6Y7W6 1299 aaKnown RBP23.58■■□□□ 1.37
VCP-202ENST00000417448 MICALL2Q8IY33 904 aa23.58■■□□□ 1.37
VCP-202ENST00000417448 TMX4Q9H1E5 349 aaPredicted RBP23.58■■□□□ 1.37
VCP-202ENST00000417448 LRRC37AA6NMS7 1700 aa23.57■■□□□ 1.36
VCP-202ENST00000417448 KIF23Q02241 960 aaPredicted RBP23.57■■□□□ 1.36
VCP-202ENST00000417448 TNIP1Q15025 636 aa23.57■■□□□ 1.36
VCP-202ENST00000417448 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
VCP-202ENST00000417448 RNF186Q9NXI6 227 aa23.57■■□□□ 1.36
VCP-202ENST00000417448 ADAMTS8Q9UP79 889 aa23.57■■□□□ 1.36
VCP-202ENST00000417448 TRPA1O75762 1119 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 EGFRP00533 1210 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
VCP-202ENST00000417448 SLC10A5Q5PT55 438 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 SAMD7Q7Z3H4 446 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 PPP1R42Q7Z4L9 355 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 SP8Q8IXZ3 490 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 MPNDQ8N594 471 aa23.56■■□□□ 1.36
VCP-202ENST00000417448 ZBTB12Q9Y330 459 aaPredicted RBP23.56■■□□□ 1.36
VCP-202ENST00000417448 EIF4A1P60842 406 aaKnown RBP23.55■■□□□ 1.36
VCP-202ENST00000417448 GBA2Q9HCG7 927 aaPredicted RBP23.55■■□□□ 1.36
VCP-202ENST00000417448 ADM5C9JUS6 153 aa23.54■■□□□ 1.36
VCP-202ENST00000417448 H7C1D1 291 aa23.54■■□□□ 1.36
VCP-202ENST00000417448 BBOX1O75936 387 aa23.53■■□□□ 1.36
VCP-202ENST00000417448 PARP10Q53GL7 1025 aa23.53■■□□□ 1.36
VCP-202ENST00000417448 KRT26Q7Z3Y9 468 aa23.53■■□□□ 1.36
VCP-202ENST00000417448 LRP10Q7Z4F1 713 aa23.53■■□□□ 1.36
VCP-202ENST00000417448 MRS2Q9HD23 443 aa23.53■■□□□ 1.36
VCP-202ENST00000417448 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
VCP-202ENST00000417448 CCDC102AQ96A19 550 aa23.52■■□□□ 1.36
VCP-202ENST00000417448 UTP14AQ9BVJ6 771 aaKnown RBP23.52■■□□□ 1.36
VCP-202ENST00000417448 ZNF157P51786 506 aaPredicted RBP23.51■■□□□ 1.35
VCP-202ENST00000417448 CTU1Q7Z7A3 348 aaKnown RBP23.51■■□□□ 1.35
VCP-202ENST00000417448 CSRNP1Q96S65 589 aa23.51■■□□□ 1.35
VCP-202ENST00000417448 PSMD14O00487 310 aa23.5■■□□□ 1.35
VCP-202ENST00000417448 SLC10A3P09131 477 aa23.5■■□□□ 1.35
VCP-202ENST00000417448 HCLS1P14317 486 aaPredicted RBP23.5■■□□□ 1.35
VCP-202ENST00000417448 C2orf69Q8N8R5 385 aa23.5■■□□□ 1.35
VCP-202ENST00000417448 DPF2Q92785 391 aa23.5■■□□□ 1.35
VCP-202ENST00000417448 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
VCP-202ENST00000417448 COL4A1P02462 1669 aa23.49■■□□□ 1.35
VCP-202ENST00000417448 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
VCP-202ENST00000417448 SCN9AQ15858 1988 aa23.49■■□□□ 1.35
VCP-202ENST00000417448 DDX60Q8IY21 1712 aaKnown RBP23.48■■□□□ 1.35
VCP-202ENST00000417448 NEFMP07197 916 aa23.48■■□□□ 1.35
VCP-202ENST00000417448 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
VCP-202ENST00000417448 HPS5Q9UPZ3 1129 aa23.48■■□□□ 1.35
VCP-202ENST00000417448 GRAPQ13588 217 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 PDIA6Q15084 440 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 NFE2L2Q16236 605 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
VCP-202ENST00000417448 GRAPLQ8TC17 118 aaPredicted RBP23.47■■□□□ 1.35
VCP-202ENST00000417448 DBNDD1Q9H9R9 158 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
VCP-202ENST00000417448 PROSER3Q2NL68 480 aa23.46■■□□□ 1.35
VCP-202ENST00000417448 RTL9Q8NET4 1388 aa23.46■■□□□ 1.35
VCP-202ENST00000417448 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
VCP-202ENST00000417448 ASTN2O75129 1339 aaPredicted RBP23.45■■□□□ 1.34
VCP-202ENST00000417448 ANXA1P04083 346 aa23.45■■□□□ 1.34
VCP-202ENST00000417448 RBM26Q5T8P6 1007 aaKnown RBP23.45■■□□□ 1.34
VCP-202ENST00000417448 DDX46Q7L014 1031 aaKnown RBP23.45■■□□□ 1.34
VCP-202ENST00000417448 DCPSQ96C86 337 aaKnown RBP23.45■■□□□ 1.34
VCP-202ENST00000417448 PNNQ9H307 717 aaKnown RBP23.45■■□□□ 1.34
VCP-202ENST00000417448 MKI67P46013 3256 aaKnown RBP23.44■■□□□ 1.34
VCP-202ENST00000417448 NLRP10Q86W26 655 aa23.44■■□□□ 1.34
VCP-202ENST00000417448 RASAL3Q86YV0 1011 aa23.44■■□□□ 1.34
VCP-202ENST00000417448 RUNDC1Q96C34 613 aa23.44■■□□□ 1.34
VCP-202ENST00000417448 RIPK4P57078 832 aa23.43■■□□□ 1.34
VCP-202ENST00000417448 TMPOP42166 694 aaKnown RBP23.42■■□□□ 1.34
VCP-202ENST00000417448 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
VCP-202ENST00000417448 GGA3Q9NZ52 723 aa23.42■■□□□ 1.34
VCP-202ENST00000417448 RIMBP2O15034 1052 aa23.41■■□□□ 1.34
VCP-202ENST00000417448 RPS12P25398 132 aaKnown RBP23.41■■□□□ 1.34
VCP-202ENST00000417448 KIF4BQ2VIQ3 1234 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms