RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 SLX4Q8IY92 1834 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 GPTP24298 496 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 ALDH1B1P30837 517 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 EPHX2P34913 555 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
CASP4-202ENST00000417440 VEGFBP49765 207 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
CASP4-202ENST00000417440 AIDAQ96BJ3 306 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 THUMPD2Q9BTF0 503 aaKnown RBP9.59□□□□□ -0.87
CASP4-202ENST00000417440 ZBTB3Q9H5J0 574 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
CASP4-202ENST00000417440 KIF6Q6ZMV9 814 aa9.58□□□□□ -0.88
CASP4-202ENST00000417440 TTLL7Q6ZT98 887 aa9.58□□□□□ -0.88
CASP4-202ENST00000417440 CNTROBQ8N137 903 aa9.58□□□□□ -0.88
CASP4-202ENST00000417440 JDP2Q8WYK2 163 aa9.58□□□□□ -0.88
CASP4-202ENST00000417440 RPGRQ92834 1020 aaKnown RBP9.58□□□□□ -0.88
CASP4-202ENST00000417440 ABT1Q9ULW3 272 aaKnown RBP9.58□□□□□ -0.88
CASP4-202ENST00000417440 CNTNAP1P78357 1384 aa9.58□□□□□ -0.88
CASP4-202ENST00000417440 PASKQ96RG2 1323 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 CCDC88AQ3V6T2 1871 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
CASP4-202ENST00000417440 ITGBL1O95965 494 aaPredicted RBP9.57□□□□□ -0.88
CASP4-202ENST00000417440 GRM1Q13255 1194 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 SLC51AQ86UW1 340 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
CASP4-202ENST00000417440 TMC2Q8TDI7 906 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
CASP4-202ENST00000417440 MAP3K15Q6ZN16 1313 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 FER1L6Q2WGJ9 1857 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 SIPA1L3O60292 1781 aaPredicted RBP9.56□□□□□ -0.88
CASP4-202ENST00000417440 FZD9O00144 591 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 LBX1P52954 281 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
CASP4-202ENST00000417440 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 GPC2Q8N158 579 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
CASP4-202ENST00000417440 PNISRQ8TF01 805 aaKnown RBP9.56□□□□□ -0.88
CASP4-202ENST00000417440 ERVV-1B6SEH8 477 aa9.55□□□□□ -0.88
CASP4-202ENST00000417440 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
CASP4-202ENST00000417440 CTCFP49711 727 aaPredicted RBP9.55□□□□□ -0.88
CASP4-202ENST00000417440 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
CASP4-202ENST00000417440 FOXK1P85037 733 aa9.55□□□□□ -0.88
CASP4-202ENST00000417440 FMR1Q06787 632 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASP4-202ENST00000417440 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
CASP4-202ENST00000417440 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
CASP4-202ENST00000417440 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
CASP4-202ENST00000417440 CACNA1SQ13698 1873 aa9.55□□□□□ -0.88
CASP4-202ENST00000417440 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
CASP4-202ENST00000417440 EIF2S2P20042 333 aaKnown RBP9.54□□□□□ -0.88
CASP4-202ENST00000417440 EPS15P42566 896 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 CRY2Q49AN0 593 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 C3orf67Q6ZVT6 689 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 ZNF428Q96B54 188 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 PSMD1Q99460 953 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
CASP4-202ENST00000417440 BCORQ6W2J9 1755 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 UBN2Q6ZU65 1347 aa9.54□□□□□ -0.88
CASP4-202ENST00000417440 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 TRAF5O00463 557 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 ANXA1P04083 346 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 DSG2Q14126 1118 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 AOC3Q16853 763 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 CC2D2BQ6DHV5 1058 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 PPP1R42Q7Z4L9 355 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 NIM1KQ8IY84 436 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 NECTIN2Q92692 538 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 PRDM10Q9NQV6 1147 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
CASP4-202ENST00000417440 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 TSPYL4Q9UJ04 414 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
CASP4-202ENST00000417440 MAPK8IP3Q9UPT6 1336 aa9.53□□□□□ -0.88
CASP4-202ENST00000417440 PPIP5K2O43314 1243 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 NTSR2O95665 410 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 SCNN1DP51172 638 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.89
CASP4-202ENST00000417440 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
CASP4-202ENST00000417440 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 NLRP3Q96P20 1036 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 PLEKHF1Q96S99 279 aa9.52□□□□□ -0.89
CASP4-202ENST00000417440 DICER1Q9UPY3 1922 aaKnown RBP9.52□□□□□ -0.89
CASP4-202ENST00000417440 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
CASP4-202ENST00000417440 HSPA8P11142 646 aaKnown RBP9.51□□□□□ -0.89
CASP4-202ENST00000417440 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
CASP4-202ENST00000417440 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
CASP4-202ENST00000417440 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
CASP4-202ENST00000417440 TMEM92Q6UXU6 159 aa9.51□□□□□ -0.89
CASP4-202ENST00000417440 CRAMP1Q96RY5 1269 aa9.51□□□□□ -0.89
CASP4-202ENST00000417440 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
CASP4-202ENST00000417440 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
CASP4-202ENST00000417440 RIPK4P57078 832 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
CASP4-202ENST00000417440 DPP8Q6V1X1 898 aaPredicted RBP9.5□□□□□ -0.89
CASP4-202ENST00000417440 USP50Q70EL3 339 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms