RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
PHRF1-203ENST00000416188 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
PHRF1-203ENST00000416188 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
PHRF1-203ENST00000416188 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
PHRF1-203ENST00000416188 UFL1O94874 794 aa18.15■□□□□ 0.5
PHRF1-203ENST00000416188 UNC5CLQ8IV45 518 aa18.15■□□□□ 0.5
PHRF1-203ENST00000416188 ESPNB1AK53 854 aa18.15■□□□□ 0.5
PHRF1-203ENST00000416188 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
PHRF1-203ENST00000416188 MEIS3Q99687 375 aa18.15■□□□□ 0.5
PHRF1-203ENST00000416188 LUC7LQ9NQ29 371 aaKnown RBP18.15■□□□□ 0.5
PHRF1-203ENST00000416188 CCDC196A0A1B0GTZ2 297 aa18.14■□□□□ 0.49
PHRF1-203ENST00000416188 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
PHRF1-203ENST00000416188 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
PHRF1-203ENST00000416188 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.49
PHRF1-203ENST00000416188 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
PHRF1-203ENST00000416188 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
PHRF1-203ENST00000416188 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
PHRF1-203ENST00000416188 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
PHRF1-203ENST00000416188 H0YHG0 523 aa18.13■□□□□ 0.49
PHRF1-203ENST00000416188 CCDC181Q5TID7 509 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 DPP8Q6V1X1 898 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-203ENST00000416188 PLBD2Q8NHP8 589 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 CFAP100Q494V2 611 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 CATIPQ7Z7H3 387 aa18.12■□□□□ 0.49
PHRF1-203ENST00000416188 TNNI2P48788 182 aa18.11■□□□□ 0.49
PHRF1-203ENST00000416188 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
PHRF1-203ENST00000416188 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
PHRF1-203ENST00000416188 CARD10Q9BWT7 1032 aa18.11■□□□□ 0.49
PHRF1-203ENST00000416188 PHAXQ9H814 394 aaKnown RBP18.11■□□□□ 0.49
PHRF1-203ENST00000416188 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-203ENST00000416188 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
PHRF1-203ENST00000416188 STX8Q9UNK0 236 aa18.11■□□□□ 0.49
PHRF1-203ENST00000416188 SMTNL1A8MU46 457 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 TBC1D2Q9BYX2 928 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 EHMT1Q9H9B1 1298 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 MATR3P43243 847 aaKnown RBP eCLIP18.1■□□□□ 0.49
PHRF1-203ENST00000416188 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 AFF2P51816 1311 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
PHRF1-203ENST00000416188 SSFA2P28290 1259 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-203ENST00000416188 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-203ENST00000416188 LDHBP07195 334 aaKnown RBP18.09■□□□□ 0.49
PHRF1-203ENST00000416188 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
PHRF1-203ENST00000416188 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
PHRF1-203ENST00000416188 C8orf76Q96K31 380 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 PHKG2P15735 406 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 HAND2P61296 217 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
PHRF1-203ENST00000416188 ECM2O94769 699 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-203ENST00000416188 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.49
PHRF1-203ENST00000416188 PLCG2P16885 1265 aa18.08■□□□□ 0.49
PHRF1-203ENST00000416188 ALDH1B1P30837 517 aa18.08■□□□□ 0.49
PHRF1-203ENST00000416188 PDE6BP35913 854 aa18.08■□□□□ 0.49
PHRF1-203ENST00000416188 SEPT11Q9NVA2 429 aaKnown RBP18.08■□□□□ 0.49
PHRF1-203ENST00000416188 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.49
PHRF1-203ENST00000416188 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.49
PHRF1-203ENST00000416188 LIMCH1Q9UPQ0 1083 aa18.08■□□□□ 0.49
PHRF1-203ENST00000416188 MPHOSPH6Q99547 160 aaKnown RBP18.08■□□□□ 0.48
PHRF1-203ENST00000416188 SLC4A4Q9Y6R1 1079 aa18.08■□□□□ 0.48
PHRF1-203ENST00000416188 ARHGAP27Q6ZUM4 889 aa18.08■□□□□ 0.48
PHRF1-203ENST00000416188 NIM1KQ8IY84 436 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
PHRF1-203ENST00000416188 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 PDE8AO60658 829 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 SLC9C2Q5TAH2 1124 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 ERLIN2O94905 339 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 UQCRHP07919 91 aa18.07■□□□□ 0.48
PHRF1-203ENST00000416188 ZFYP08048 801 aaPredicted RBP18.07■□□□□ 0.48
PHRF1-203ENST00000416188 KIF5BP33176 963 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 KLHL10Q6JEL2 608 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-203ENST00000416188 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 KDM5CP41229 1560 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 GOLGA8AA7E2F4 631 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 EPB41L2O43491 1005 aaKnown RBP18.06■□□□□ 0.48
PHRF1-203ENST00000416188 PRKCSHP14314 528 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-203ENST00000416188 ITGA6P23229 1130 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 PPP4R3AQ6IN85 833 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms