RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
LMBR1-204ENST00000415428 COL11A1P12107 1806 aaPredicted RBP8.45□□□□□ -1.06
LMBR1-204ENST00000415428 LGR6Q9HBX8 967 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 FAM205AQ6ZU69 1335 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-204ENST00000415428 SNRPA1P09661 255 aaKnown RBP8.44□□□□□ -1.06
LMBR1-204ENST00000415428 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
LMBR1-204ENST00000415428 BEGAINQ9BUH8 593 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 UBN2Q6ZU65 1347 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 HOXB7P09629 217 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 EPS15P42566 896 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 CXCL9Q07325 125 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 ZNF333Q96JL9 665 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
LMBR1-204ENST00000415428 GNAT3A8MTJ3 354 aa8.43□□□□□ -1.06
LMBR1-204ENST00000415428 GBA2Q9HCG7 927 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-204ENST00000415428 MED23Q9ULK4 1368 aa8.43□□□□□ -1.06
LMBR1-204ENST00000415428 YDJCA8MPS7 323 aa8.43□□□□□ -1.06
LMBR1-204ENST00000415428 MAP1SQ66K74 1059 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-204ENST00000415428 KIF23Q02241 960 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-204ENST00000415428 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
LMBR1-204ENST00000415428 ABCC4O15439 1325 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 SREBF2Q12772 1141 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 DOCK1Q14185 1865 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 CIAPIN1Q6FI81 312 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 MYO3BQ8WXR4 1341 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 PTPN22Q9Y2R2 807 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 NIM1KQ8IY84 436 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 SIN3AQ96ST3 1273 aa8.42□□□□□ -1.06
LMBR1-204ENST00000415428 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-204ENST00000415428 SOX12O15370 315 aa8.41□□□□□ -1.06
LMBR1-204ENST00000415428 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
LMBR1-204ENST00000415428 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
LMBR1-204ENST00000415428 GRAPQ13588 217 aa8.41□□□□□ -1.06
LMBR1-204ENST00000415428 GRAPLQ8TC17 118 aaPredicted RBP8.41□□□□□ -1.06
LMBR1-204ENST00000415428 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
LMBR1-204ENST00000415428 CELF2O95319 508 aaKnown RBP8.4□□□□□ -1.06
LMBR1-204ENST00000415428 PDIA6Q15084 440 aa8.4□□□□□ -1.06
LMBR1-204ENST00000415428 GPR25O00155 361 aa8.4□□□□□ -1.06
LMBR1-204ENST00000415428 GMPSP49915 693 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-204ENST00000415428 MYPNQ86TC9 1320 aa8.4□□□□□ -1.07
LMBR1-204ENST00000415428 FKTNO75072 461 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 ABT1Q9ULW3 272 aaKnown RBP8.39□□□□□ -1.07
LMBR1-204ENST00000415428 ZSWIM8A7E2V4 1837 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 C2orf69Q8N8R5 385 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 STXBP5LQ9Y2K9 1186 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 MANSC4A6NHS7 340 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-204ENST00000415428 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 TRPM4Q8TD43 1214 aa8.39□□□□□ -1.07
LMBR1-204ENST00000415428 TRAF5O00463 557 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 SULT6B1Q6IMI4 303 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 ERO1AQ96HE7 468 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 HSP90AB3PQ58FF7 597 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
LMBR1-204ENST00000415428 NBPF5PQ86XG9 351 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-204ENST00000415428 ZNF296Q8WUU4 475 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-204ENST00000415428 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.071e-8■□□□□ 9.9
LMBR1-204ENST00000415428 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
LMBR1-204ENST00000415428 PLEKHF1Q96S99 279 aa8.37□□□□□ -1.07
LMBR1-204ENST00000415428 SLC45A1Q9Y2W3 748 aa8.37□□□□□ -1.07
LMBR1-204ENST00000415428 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
LMBR1-204ENST00000415428 RLFQ13129 1914 aa8.36□□□□□ -1.07
LMBR1-204ENST00000415428 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
LMBR1-204ENST00000415428 ZIC5Q96T25 663 aa8.36□□□□□ -1.07
LMBR1-204ENST00000415428 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
LMBR1-204ENST00000415428 PPP1R42Q7Z4L9 355 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 SHISA4Q96DD7 197 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 GLIS2Q9BZE0 524 aaPredicted RBP8.35□□□□□ -1.07
LMBR1-204ENST00000415428 COL4A6Q14031 1691 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 IGHA2P01877 340 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 EIF4A1P60842 406 aaKnown RBP8.35□□□□□ -1.07
LMBR1-204ENST00000415428 OTOP1Q7RTM1 612 aa8.35□□□□□ -1.07
LMBR1-204ENST00000415428 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
LMBR1-204ENST00000415428 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-204ENST00000415428 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.07
LMBR1-204ENST00000415428 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
LMBR1-204ENST00000415428 TTC5Q8N0Z6 440 aa8.34□□□□□ -1.07
LMBR1-204ENST00000415428 RSBN1LQ6PCB5 846 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-204ENST00000415428 PLA2G12BQ9BX93 195 aa8.34□□□□□ -1.07
LMBR1-204ENST00000415428 SUSD4Q5VX71 490 aa8.34□□□□□ -1.07
LMBR1-204ENST00000415428 H7C1D1 291 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
LMBR1-204ENST00000415428 ANKRD13DQ6ZTN6 518 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 EYA3Q99504 573 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 KIF16BQ96L93 1317 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 MYH13Q9UKX3 1938 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 HLFQ16534 295 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 APOBEC3FQ8IUX4 373 aaKnown RBP8.33□□□□□ -1.08
LMBR1-204ENST00000415428 HUNKP57058 714 aa8.33□□□□□ -1.08
LMBR1-204ENST00000415428 EAPPQ56P03 285 aaPredicted RBP8.32□□□□□ -1.08
LMBR1-204ENST00000415428 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 USP16Q9Y5T5 823 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 RFX7Q2KHR2 1363 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms