RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SASH3O75995 380 aa10.51□□□□□ -0.73
ATG4C-204ENST00000414558 IGHA1P01876 353 aa10.51□□□□□ -0.73
ATG4C-204ENST00000414558 TARSP26639 723 aaKnown RBP10.51□□□□□ -0.73
ATG4C-204ENST00000414558 SSFA2P28290 1259 aa10.51□□□□□ -0.73
ATG4C-204ENST00000414558 ARID4AP29374 1257 aaPredicted RBP10.51□□□□□ -0.73
ATG4C-204ENST00000414558 TRIM11Q96F44 468 aa10.51□□□□□ -0.73
ATG4C-204ENST00000414558 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
ATG4C-204ENST00000414558 GPAT2Q6NUI2 795 aa10.5□□□□□ -0.73
ATG4C-204ENST00000414558 C20orf204Q6ZNR8 217 aa10.5□□□□□ -0.73
ATG4C-204ENST00000414558 DHX32Q7L7V1 743 aaKnown RBP10.5□□□□□ -0.73
ATG4C-204ENST00000414558 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
ATG4C-204ENST00000414558 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
ATG4C-204ENST00000414558 KCNMB2Q9Y691 235 aa10.5□□□□□ -0.73
ATG4C-204ENST00000414558 LILRB5O75023 590 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 ZAP70P43403 619 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 PLA2G4EQ3MJ16 856 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 FAM26DQ5JW98 314 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 ARID3AQ99856 593 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
ATG4C-204ENST00000414558 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
ATG4C-204ENST00000414558 HELQQ8TDG4 1101 aa10.48□□□□□ -0.73
ATG4C-204ENST00000414558 KRBA1A5PL33 1030 aa10.47□□□□□ -0.73
ATG4C-204ENST00000414558 GPLD1P80108 840 aa10.47□□□□□ -0.73
ATG4C-204ENST00000414558 FAM35AQ86V20 835 aa10.47□□□□□ -0.73
ATG4C-204ENST00000414558 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
ATG4C-204ENST00000414558 NRLP54845 237 aa10.46□□□□□ -0.73
ATG4C-204ENST00000414558 PSAPL1Q6NUJ1 521 aa10.46□□□□□ -0.73
ATG4C-204ENST00000414558 C8orf86Q6ZUL3 223 aa10.46□□□□□ -0.73
ATG4C-204ENST00000414558 JPH1Q9HDC5 661 aaPredicted RBP10.46□□□□□ -0.73
ATG4C-204ENST00000414558 TLR7Q9NYK1 1049 aaKnown RBP10.46□□□□□ -0.73
ATG4C-204ENST00000414558 NAGPAQ9UK23 515 aa10.46□□□□□ -0.73
ATG4C-204ENST00000414558 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
ATG4C-204ENST00000414558 UBAP1LF5GYI3 381 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 ZBTB39O15060 712 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 PSAPP07602 524 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 SPATA31C1P0DKV0 1188 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 NID1P14543 1247 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 COL9A3Q14050 684 aaPredicted RBP10.45□□□□□ -0.74
ATG4C-204ENST00000414558 TRIP4Q15650 581 aaPredicted RBP10.45□□□□□ -0.74
ATG4C-204ENST00000414558 PRRT3Q5FWE3 981 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 FRRS1LQ9P0K9 344 aa10.45□□□□□ -0.74
ATG4C-204ENST00000414558 MSTNO14793 375 aa10.44□□□□□ -0.74
ATG4C-204ENST00000414558 RGS9O75916 674 aaPredicted RBP10.44□□□□□ -0.74
ATG4C-204ENST00000414558 CPB1P15086 417 aa10.44□□□□□ -0.74
ATG4C-204ENST00000414558 SCNN1AP37088 669 aa10.44□□□□□ -0.74
ATG4C-204ENST00000414558 PLAURQ03405 335 aa10.44□□□□□ -0.74
ATG4C-204ENST00000414558 GTF3C2Q8WUA4 911 aaPredicted RBP10.44□□□□□ -0.74
ATG4C-204ENST00000414558 NUDT8Q8WV74 236 aa10.44□□□□□ -0.74
ATG4C-204ENST00000414558 CARNS1A5YM72 827 aa10.43□□□□□ -0.74
ATG4C-204ENST00000414558 ZBTB42B2RXF5 422 aa10.43□□□□□ -0.74
ATG4C-204ENST00000414558 SOX18P35713 384 aa10.43□□□□□ -0.74
ATG4C-204ENST00000414558 MLLT1Q03111 559 aaPredicted RBP10.43□□□□□ -0.74
ATG4C-204ENST00000414558 MMP20O60882 483 aa10.42□□□□□ -0.74
ATG4C-204ENST00000414558 ITGB2P05107 769 aa10.42□□□□□ -0.74
ATG4C-204ENST00000414558 ELMSAN1Q6PJG2 1045 aa10.42□□□□□ -0.74
ATG4C-204ENST00000414558 HOXD8P13378 290 aaPredicted RBP10.41□□□□□ -0.74
ATG4C-204ENST00000414558 NOM1Q5C9Z4 860 aaKnown RBP10.41□□□□□ -0.74
ATG4C-204ENST00000414558 PERM1Q5SV97 790 aa10.41□□□□□ -0.74
ATG4C-204ENST00000414558 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
ATG4C-204ENST00000414558 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.74
ATG4C-204ENST00000414558 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
ATG4C-204ENST00000414558 TRIM28Q13263 835 aaKnown RBP10.4□□□□□ -0.74
ATG4C-204ENST00000414558 TRAPPC3LQ5T215 181 aa10.4□□□□□ -0.74
ATG4C-204ENST00000414558 SPOCK3Q9BQ16 436 aa10.4□□□□□ -0.74
ATG4C-204ENST00000414558 LPIN3Q9BQK8 851 aa10.4□□□□□ -0.74
ATG4C-204ENST00000414558 PCSK2P16519 638 aa10.39□□□□□ -0.75
ATG4C-204ENST00000414558 EIF2AK2P19525 551 aaKnown RBP10.39□□□□□ -0.75
ATG4C-204ENST00000414558 MPSTP25325 297 aa10.39□□□□□ -0.75
ATG4C-204ENST00000414558 ALKBH2Q6NS38 261 aa10.39□□□□□ -0.75
ATG4C-204ENST00000414558 ATCAYQ86WG3 371 aa10.39□□□□□ -0.75
ATG4C-204ENST00000414558 TTC9Q92623 222 aa10.39□□□□□ -0.75
ATG4C-204ENST00000414558 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
ATG4C-204ENST00000414558 LOC102724428A0A0B4J2F2 783 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 SIK1P57059 783 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 PDE4CQ08493 712 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 PDE12Q6L8Q7 609 aaKnown RBP10.38□□□□□ -0.75
ATG4C-204ENST00000414558 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 OR13H1Q8NG92 308 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 NSUN5Q96P11 429 aaKnown RBP10.38□□□□□ -0.75
ATG4C-204ENST00000414558 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
ATG4C-204ENST00000414558 C1QTNF9BB2RNN3 333 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 APBA3O96018 575 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 GHRHP01286 108 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 PROCP04070 461 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 EIF1AXP47813 144 aaKnown RBP10.37□□□□□ -0.75
ATG4C-204ENST00000414558 RAC1P63000 192 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 SF3B2Q13435 895 aaKnown RBP10.37□□□□□ -0.75
ATG4C-204ENST00000414558 TTC39BQ5VTQ0 682 aaPredicted RBP10.37□□□□□ -0.75
ATG4C-204ENST00000414558 CD163Q86VB7 1156 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 EDEM1Q92611 657 aa10.37□□□□□ -0.75
ATG4C-204ENST00000414558 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 FAM13AO94988 1023 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 NPR3P17342 541 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 CHRNA4P43681 627 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
ATG4C-204ENST00000414558 MTMR3Q13615 1198 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 TTC16Q8NEE8 873 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms