RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 ANAPC4Q9UJX5 808 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 MTIF2P46199 727 aaKnown RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 EXOC6BQ9Y2D4 811 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 HLTFQ14527 1009 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 ANKRD36BQ8N2N9 1353 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 IVLP07476 585 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 BICD1Q96G01 975 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
SCN5A-204ENST00000414099 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 ANKS4BQ8N8V4 417 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
SCN5A-204ENST00000414099 UBA7P41226 1012 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 UHRF1BP1LA0JNW5 1464 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 WDR7Q9Y4E6 1490 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 HSPA4P34932 840 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 TNNI2P48788 182 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 IQCGQ9H095 443 aaKnown RBP12.15□□□□□ -0.46
SCN5A-204ENST00000414099 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 IL16Q14005 1332 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 CCDC40Q4G0X9 1142 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 CCDC77Q9BR77 488 aa12.15□□□□□ -0.46
SCN5A-204ENST00000414099 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.47
SCN5A-204ENST00000414099 CEP128Q6ZU80 1094 aa12.15□□□□□ -0.47
SCN5A-204ENST00000414099 GNAT2P19087 354 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
SCN5A-204ENST00000414099 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
SCN5A-204ENST00000414099 TMCO5BA8MYB1 307 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC14Q49A88 953 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
SCN5A-204ENST00000414099 SYCE3A1L190 88 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 EYA3Q99504 573 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 MAATS1Q7Z4T9 603 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 HOOK2Q96ED9 719 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-204ENST00000414099 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
SCN5A-204ENST00000414099 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCN5A-204ENST00000414099 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 ESR2Q92731 530 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 OPA1O60313 960 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 FLIIQ13045 1269 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 FBF1Q8TES7 1133 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
SCN5A-204ENST00000414099 MACROD2A1Z1Q3 448 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 JAKMIP2Q96AA8 810 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 PRC1O43663 620 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 GPTP24298 496 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
SCN5A-204ENST00000414099 TNNT1P13805 278 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC82Q8N4S0 544 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
SCN5A-204ENST00000414099 CYLC1P35663 651 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-204ENST00000414099 MAP7D1Q3KQU3 841 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
SCN5A-204ENST00000414099 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 ASXL1Q8IXJ9 1541 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 SMC6Q96SB8 1091 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 C11orf95C9JLR9 678 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 NOP2P46087 812 aaKnown RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CALM1P0DP23 149 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CALM2P0DP24 149 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CALM3P0DP25 149 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CA8P35219 290 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 WTAPQ15007 396 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms