RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 RTKN2Q8IZC4 609 aa10.95□□□□□ -0.66
UPF3AP1-201ENST00000413731 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
UPF3AP1-201ENST00000413731 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 NUTM1Q86Y26 1132 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 GPC2Q8N158 579 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
UPF3AP1-201ENST00000413731 TAF1P21675 1872 aa10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 DEFB115Q30KQ5 88 aa10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 PSMD1Q99460 953 aa10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 ABT1Q9ULW3 272 aaKnown RBP10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 CASP8AP2Q9UKL3 1982 aa10.93□□□□□ -0.66
UPF3AP1-201ENST00000413731 UBN2Q6ZU65 1347 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 ALDH1B1P30837 517 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 SCNN1DP51172 638 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 ABHD8Q96I13 439 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
UPF3AP1-201ENST00000413731 MAP3K15Q6ZN16 1313 aa10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 JDP2Q8WYK2 163 aa10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 MIS18AQ9NYP9 233 aa10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 NUDCQ9Y266 331 aa10.91□□□□□ -0.66
UPF3AP1-201ENST00000413731 TRAF5O00463 557 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 GPTP24298 496 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 LMOD1P29536 600 aaPredicted RBP10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 EPS15P42566 896 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 TTLL7Q6ZT98 887 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 RPGRQ92834 1020 aaKnown RBP10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 NYXQ9GZU5 481 aa10.9□□□□□ -0.66
UPF3AP1-201ENST00000413731 LRRC37AA6NMS7 1700 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 GRM1Q13255 1194 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 CYP4F22Q6NT55 531 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 POTEHQ6S545 545 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 KIF6Q6ZMV9 814 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 CAPNS2Q96L46 248 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 DUOX1Q9NRD9 1551 aa10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 DDX60Q8IY21 1712 aaKnown RBP10.89□□□□□ -0.67
UPF3AP1-201ENST00000413731 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 TCERG1O14776 1098 aaKnown RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 HTATSF1O43719 755 aaKnown RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 NTSR2O95665 410 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 HOXA10P31260 410 aaPredicted RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 CAMK2BQ13554 666 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 RALBP1Q15311 655 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 TAF7Q15545 349 aaPredicted RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 SUSD4Q5VX71 490 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 CC2D2BQ6DHV5 1058 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 THUMPD2Q9BTF0 503 aaKnown RBP10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
UPF3AP1-201ENST00000413731 PPIP5K2O43314 1243 aa10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 MYL6BP14649 208 aa10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 AOC3Q16853 763 aa10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 CST9Q5W186 159 aa10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
UPF3AP1-201ENST00000413731 MYBBP1AQ9BQG0 1328 aaKnown RBP10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 AOC2O75106 756 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 SLC34A2O95436 690 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 ECE1P42892 770 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 ZNF34Q8IZ26 560 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 RBM17Q96I25 401 aaKnown RBP10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 CRAMP1Q96RY5 1269 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 KDM4CQ9H3R0 1056 aa10.86□□□□□ -0.67
UPF3AP1-201ENST00000413731 COL4A1P02462 1669 aa10.85□□□□□ -0.67
UPF3AP1-201ENST00000413731 ABCC4O15439 1325 aa10.85□□□□□ -0.67
UPF3AP1-201ENST00000413731 PNISRQ8TF01 805 aaKnown RBP10.85□□□□□ -0.67
UPF3AP1-201ENST00000413731 GPR101Q96P66 508 aaPredicted RBP10.85□□□□□ -0.67
UPF3AP1-201ENST00000413731 GPRC5DQ9NZD1 345 aa10.85□□□□□ -0.67
UPF3AP1-201ENST00000413731 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
UPF3AP1-201ENST00000413731 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms