RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-205ENST00000413658 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
ZNF3-205ENST00000413658 HCLS1P14317 486 aaPredicted RBP12.98□□□□□ -0.33
ZNF3-205ENST00000413658 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
ZNF3-205ENST00000413658 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
ZNF3-205ENST00000413658 COL4A1P02462 1669 aa12.97□□□□□ -0.33
ZNF3-205ENST00000413658 IRS4O14654 1257 aaPredicted RBP12.97□□□□□ -0.33
ZNF3-205ENST00000413658 KCNA3P22001 575 aa12.97□□□□□ -0.33
ZNF3-205ENST00000413658 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
ZNF3-205ENST00000413658 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
ZNF3-205ENST00000413658 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
ZNF3-205ENST00000413658 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
ZNF3-205ENST00000413658 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
ZNF3-205ENST00000413658 NPHP1O15259 732 aa12.96□□□□□ -0.33
ZNF3-205ENST00000413658 MS4A1P11836 297 aa12.96□□□□□ -0.33
ZNF3-205ENST00000413658 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-205ENST00000413658 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
ZNF3-205ENST00000413658 MEIS3Q99687 375 aa12.96□□□□□ -0.33
ZNF3-205ENST00000413658 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-205ENST00000413658 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-205ENST00000413658 SUPT16HQ9Y5B9 1047 aaKnown RBP12.96□□□□□ -0.33
ZNF3-205ENST00000413658 SLX4Q8IY92 1834 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 PDE6BP35913 854 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 TGFB2P61812 414 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 FOXO4P98177 505 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 SUCLG2Q96I99 432 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 SYT17Q9BSW7 474 aa12.96□□□□□ -0.34
ZNF3-205ENST00000413658 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-205ENST00000413658 PDE8AO60658 829 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 SRGNP10124 158 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 CHRNA5P30532 468 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
ZNF3-205ENST00000413658 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
ZNF3-205ENST00000413658 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 UTRNP46939 3433 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
ZNF3-205ENST00000413658 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 CSF1RP07333 972 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 DPEP1P16444 411 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 CTSWP56202 376 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
ZNF3-205ENST00000413658 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
ZNF3-205ENST00000413658 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
ZNF3-205ENST00000413658 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
ZNF3-205ENST00000413658 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
ZNF3-205ENST00000413658 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
ZNF3-205ENST00000413658 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
ZNF3-205ENST00000413658 H0YIN7 160 aa12.92□□□□□ -0.34
ZNF3-205ENST00000413658 GNAI3P08754 354 aa12.92□□□□□ -0.34
ZNF3-205ENST00000413658 UBTFL1P0CB47 393 aaPredicted RBP12.92□□□□□ -0.34
ZNF3-205ENST00000413658 RABL6Q3YEC7 729 aaPredicted RBP12.92□□□□□ -0.34
ZNF3-205ENST00000413658 BICC1Q9H694 974 aaKnown RBP12.92□□□□□ -0.34
ZNF3-205ENST00000413658 RTL9Q8NET4 1388 aa12.92□□□□□ -0.34
ZNF3-205ENST00000413658 NPR1P16066 1061 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
ZNF3-205ENST00000413658 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
ZNF3-205ENST00000413658 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
ZNF3-205ENST00000413658 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
ZNF3-205ENST00000413658 GREM2Q9H772 168 aa12.9□□□□□ -0.34
ZNF3-205ENST00000413658 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
ZNF3-205ENST00000413658 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
ZNF3-205ENST00000413658 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
ZNF3-205ENST00000413658 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
ZNF3-205ENST00000413658 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
ZNF3-205ENST00000413658 SEC31BQ9NQW1 1179 aa12.89□□□□□ -0.35
ZNF3-205ENST00000413658 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
ZNF3-205ENST00000413658 GNAI2P04899 355 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.359e-6■■□□□ 12.8
ZNF3-205ENST00000413658 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
ZNF3-205ENST00000413658 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 ITGA6P23229 1130 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 MTX1Q13505 466 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 GRAPQ13588 217 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
ZNF3-205ENST00000413658 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
ZNF3-205ENST00000413658 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-205ENST00000413658 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 CELF1Q92879 486 aaKnown RBP12.88□□□□□ -0.35
ZNF3-205ENST00000413658 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 C1orf115Q9H7X2 142 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
ZNF3-205ENST00000413658 SNED1Q8TER0 1413 aa12.87□□□□□ -0.35
ZNF3-205ENST00000413658 RFX5P48382 616 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-205ENST00000413658 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
ZNF3-205ENST00000413658 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
ZNF3-205ENST00000413658 RPS8P62241 208 aaKnown RBP12.86□□□□□ -0.35
ZNF3-205ENST00000413658 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
ZNF3-205ENST00000413658 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms