RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
SOX9-AS1-201ENST00000412640 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
SOX9-AS1-201ENST00000412640 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
SOX9-AS1-201ENST00000412640 COL6A3P12111 3177 aa12.55□□□□□ -0.4
SOX9-AS1-201ENST00000412640 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 FKTNO75072 461 aa12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 TNIP1Q15025 636 aa12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
SOX9-AS1-201ENST00000412640 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
SOX9-AS1-201ENST00000412640 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-201ENST00000412640 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
SOX9-AS1-201ENST00000412640 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
SOX9-AS1-201ENST00000412640 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
SOX9-AS1-201ENST00000412640 POLR2AP24928 1970 aaKnown RBP12.52□□□□□ -0.4
SOX9-AS1-201ENST00000412640 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
SOX9-AS1-201ENST00000412640 HLFQ16534 295 aa12.52□□□□□ -0.41
SOX9-AS1-201ENST00000412640 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
SOX9-AS1-201ENST00000412640 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
SOX9-AS1-201ENST00000412640 HTTP42858 3142 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 YDJCA8MPS7 323 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 KCNQ3O43525 872 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 HMOX1P09601 288 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 IL13P35225 146 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
SOX9-AS1-201ENST00000412640 TEFQ10587 303 aa12.5□□□□□ -0.41
SOX9-AS1-201ENST00000412640 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
SOX9-AS1-201ENST00000412640 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
SOX9-AS1-201ENST00000412640 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
SOX9-AS1-201ENST00000412640 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
SOX9-AS1-201ENST00000412640 CENPFP49454 3210 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 ASTN2O75129 1339 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 TM4SF4P48230 202 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
SOX9-AS1-201ENST00000412640 UBE2Q2LH0YL09 131 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 KIAA2012Q0VF49 1180 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 DPF2Q92785 391 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 RTFDC1Q9BY42 306 aaPredicted RBP12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 GGA3Q9NZ52 723 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 RBBP6Q7Z6E9 1792 aaKnown RBP12.48□□□□□ -0.41
SOX9-AS1-201ENST00000412640 BRCA2P51587 3418 aa12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 RIC1Q4ADV7 1423 aa12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 PSMD14O00487 310 aa12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
SOX9-AS1-201ENST00000412640 KIAA0100Q14667 2235 aaKnown RBP12.46□□□□□ -0.41
SOX9-AS1-201ENST00000412640 MPNDQ8N594 471 aa12.46□□□□□ -0.41
SOX9-AS1-201ENST00000412640 CEP290O15078 2479 aa12.45□□□□□ -0.42
SOX9-AS1-201ENST00000412640 KIF4BQ2VIQ3 1234 aa12.45□□□□□ -0.42
SOX9-AS1-201ENST00000412640 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
SOX9-AS1-201ENST00000412640 COL25A1Q9BXS0 654 aaPredicted RBP12.45□□□□□ -0.42
SOX9-AS1-201ENST00000412640 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
SOX9-AS1-201ENST00000412640 RGL2O15211 777 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 GPTP24298 496 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 FKBP1BP68106 108 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 CFHR5Q9BXR6 569 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SCAF8Q9UPN6 1271 aaKnown RBP12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 RANBP2P49792 3224 aaKnown RBP12.44□□□□□ -0.42
SOX9-AS1-201ENST00000412640 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 ANGEL2Q5VTE6 544 aaKnown RBP12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 PRAMEF18Q5VWM3 479 aa12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 DBNDD1Q9H9R9 158 aa12.43□□□□□ -0.42
SOX9-AS1-201ENST00000412640 ABCC4O15439 1325 aa12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 MYCP01106 439 aaPredicted RBP12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SREBF2Q12772 1141 aa12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 LRCH3Q96II8 777 aa12.42□□□□□ -0.42
SOX9-AS1-201ENST00000412640 UBN2Q6ZU65 1347 aa12.41□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
SOX9-AS1-201ENST00000412640 GNAT3A8MTJ3 354 aa12.41□□□□□ -0.42
SOX9-AS1-201ENST00000412640 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
SOX9-AS1-201ENST00000412640 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
SOX9-AS1-201ENST00000412640 CD99L2Q8TCZ2 262 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms