RNA–Protein interactions for RNA: ENST00000412112.3

LINC01965-201, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 3 BASIC

Gene LINC01965, Length 1,378 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-201ENST00000412112 IL21Q9HBE4 155 aa13.02□□□□□ -0.33
LINC01965-201ENST00000412112 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
LINC01965-201ENST00000412112 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
LINC01965-201ENST00000412112 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
LINC01965-201ENST00000412112 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
LINC01965-201ENST00000412112 RALBP1Q15311 655 aa13.01□□□□□ -0.33
LINC01965-201ENST00000412112 PXYLP1Q8TE99 480 aa13.01□□□□□ -0.33
LINC01965-201ENST00000412112 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
LINC01965-201ENST00000412112 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
LINC01965-201ENST00000412112 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
LINC01965-201ENST00000412112 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
LINC01965-201ENST00000412112 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
LINC01965-201ENST00000412112 TJP1Q07157 1748 aa13.01□□□□□ -0.33
LINC01965-201ENST00000412112 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
LINC01965-201ENST00000412112 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
LINC01965-201ENST00000412112 MCM10Q7L590 875 aa13□□□□□ -0.33
LINC01965-201ENST00000412112 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
LINC01965-201ENST00000412112 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
LINC01965-201ENST00000412112 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
LINC01965-201ENST00000412112 COL15A1P39059 1388 aa12.99□□□□□ -0.33
LINC01965-201ENST00000412112 A0A087WZG4 1122 aa12.99□□□□□ -0.33
LINC01965-201ENST00000412112 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
LINC01965-201ENST00000412112 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
LINC01965-201ENST00000412112 CHD4Q14839 1912 aa12.98□□□□□ -0.33
LINC01965-201ENST00000412112 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
LINC01965-201ENST00000412112 FECHP22830 423 aa12.98□□□□□ -0.33
LINC01965-201ENST00000412112 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
LINC01965-201ENST00000412112 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
LINC01965-201ENST00000412112 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
LINC01965-201ENST00000412112 TM4SF1P30408 202 aa12.97□□□□□ -0.33
LINC01965-201ENST00000412112 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
LINC01965-201ENST00000412112 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
LINC01965-201ENST00000412112 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
LINC01965-201ENST00000412112 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
LINC01965-201ENST00000412112 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
LINC01965-201ENST00000412112 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.33
LINC01965-201ENST00000412112 KCNQ3O43525 872 aa12.96□□□□□ -0.33
LINC01965-201ENST00000412112 DPEP1P16444 411 aa12.96□□□□□ -0.33
LINC01965-201ENST00000412112 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
LINC01965-201ENST00000412112 DDR1Q08345 913 aa12.96□□□□□ -0.33
LINC01965-201ENST00000412112 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
LINC01965-201ENST00000412112 BCS1LQ9Y276 419 aa12.96□□□□□ -0.33
LINC01965-201ENST00000412112 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
LINC01965-201ENST00000412112 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
LINC01965-201ENST00000412112 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
LINC01965-201ENST00000412112 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
LINC01965-201ENST00000412112 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
LINC01965-201ENST00000412112 UBR2Q8IWV8 1755 aa12.95□□□□□ -0.34
LINC01965-201ENST00000412112 UTRNP46939 3433 aa12.95□□□□□ -0.34
LINC01965-201ENST00000412112 A1BGP04217 495 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 NFIXQ14938 502 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
LINC01965-201ENST00000412112 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 MYBBP1AQ9BQG0 1328 aaKnown RBP12.94□□□□□ -0.34
LINC01965-201ENST00000412112 SERPINB2P05120 415 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 TBC1D2BQ9UPU7 963 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
LINC01965-201ENST00000412112 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
LINC01965-201ENST00000412112 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
LINC01965-201ENST00000412112 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
LINC01965-201ENST00000412112 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
LINC01965-201ENST00000412112 KCNA3P22001 575 aa12.92□□□□□ -0.34
LINC01965-201ENST00000412112 COPS2P61201 443 aa12.92□□□□□ -0.34
LINC01965-201ENST00000412112 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
LINC01965-201ENST00000412112 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
LINC01965-201ENST00000412112 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
LINC01965-201ENST00000412112 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
LINC01965-201ENST00000412112 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
LINC01965-201ENST00000412112 CHRNA5P30532 468 aa12.91□□□□□ -0.34
LINC01965-201ENST00000412112 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
LINC01965-201ENST00000412112 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
LINC01965-201ENST00000412112 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
LINC01965-201ENST00000412112 NPHP1O15259 732 aa12.9□□□□□ -0.34
LINC01965-201ENST00000412112 CFHP08603 1231 aa12.9□□□□□ -0.34
LINC01965-201ENST00000412112 SLC10A3P09131 477 aa12.9□□□□□ -0.34
LINC01965-201ENST00000412112 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
LINC01965-201ENST00000412112 SETDB2Q96T68 719 aa12.9□□□□□ -0.34
LINC01965-201ENST00000412112 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
LINC01965-201ENST00000412112 N4BP2Q86UW6 1770 aaPredicted RBP12.9□□□□□ -0.35
LINC01965-201ENST00000412112 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
LINC01965-201ENST00000412112 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
LINC01965-201ENST00000412112 RIPK4P57078 832 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 LMOD3Q0VAK6 560 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC01965-201ENST00000412112 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
LINC01965-201ENST00000412112 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
LINC01965-201ENST00000412112 H0YIN7 160 aa12.88□□□□□ -0.35
LINC01965-201ENST00000412112 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
LINC01965-201ENST00000412112 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
LINC01965-201ENST00000412112 ADCY9O60503 1353 aa12.87□□□□□ -0.35
LINC01965-201ENST00000412112 PDE6BP35913 854 aa12.87□□□□□ -0.35
LINC01965-201ENST00000412112 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
LINC01965-201ENST00000412112 BLOC1S3Q6QNY0 202 aa12.87□□□□□ -0.35
LINC01965-201ENST00000412112 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
LINC01965-201ENST00000412112 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
LINC01965-201ENST00000412112 NKX2-3Q8TAU0 364 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms