RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
HDAC9-205ENST00000411993 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 LILRB5O75023 590 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 MAP3K6O95382 1288 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
HDAC9-205ENST00000411993 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-205ENST00000411993 PRRT3Q5FWE3 981 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 DHX32Q7L7V1 743 aaKnown RBP9.35□□□□□ -0.91
HDAC9-205ENST00000411993 JPH1Q9HDC5 661 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-205ENST00000411993 FAM13BQ9NYF5 915 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
HDAC9-205ENST00000411993 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
HDAC9-205ENST00000411993 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
HDAC9-205ENST00000411993 ITGB2P05107 769 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 SPATA31C1P0DKV0 1188 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 CPB1P15086 417 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 PSAPL1Q6NUJ1 521 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 C20orf204Q6ZNR8 217 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 FAM35AQ86V20 835 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 ABTB2Q8N961 1025 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 PIK3R5Q8WYR1 880 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 STIM2Q9P246 746 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 SEPT3Q9UH03 358 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 NAGPAQ9UK23 515 aa9.33□□□□□ -0.92
HDAC9-205ENST00000411993 EGFRP00533 1210 aa9.32□□□□□ -0.92
HDAC9-205ENST00000411993 ZAP70P43403 619 aa9.32□□□□□ -0.92
HDAC9-205ENST00000411993 MLLT1Q03111 559 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-205ENST00000411993 KCNMB2Q9Y691 235 aa9.32□□□□□ -0.92
HDAC9-205ENST00000411993 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
HDAC9-205ENST00000411993 RGS9O75916 674 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-205ENST00000411993 NID1P14543 1247 aa9.31□□□□□ -0.92
HDAC9-205ENST00000411993 FAM26DQ5JW98 314 aa9.31□□□□□ -0.92
HDAC9-205ENST00000411993 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 PSAPP07602 524 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 GPLD1P80108 840 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 TRIM28Q13263 835 aaKnown RBP9.3□□□□□ -0.92
HDAC9-205ENST00000411993 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-205ENST00000411993 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
HDAC9-205ENST00000411993 C1QTNF9BB2RNN3 333 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 PROCP04070 461 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 NRLP54845 237 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-205ENST00000411993 ELMSAN1Q6PJG2 1045 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 GPR152Q8TDT2 470 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 ARID3AQ99856 593 aa9.29□□□□□ -0.92
HDAC9-205ENST00000411993 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
HDAC9-205ENST00000411993 ZBTB42B2RXF5 422 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 SUPT5HO00267 1087 aaKnown RBP9.28□□□□□ -0.92
HDAC9-205ENST00000411993 APBA3O96018 575 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 EIF2AK2P19525 551 aaKnown RBP9.28□□□□□ -0.92
HDAC9-205ENST00000411993 PLAURQ03405 335 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 HFE2Q6ZVN8 426 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 CD163Q86VB7 1156 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 HELQQ8TDG4 1101 aa9.28□□□□□ -0.92
HDAC9-205ENST00000411993 FNDC3AQ9Y2H6 1198 aaKnown RBP9.28□□□□□ -0.92
HDAC9-205ENST00000411993 MMP20O60882 483 aa9.27□□□□□ -0.93
HDAC9-205ENST00000411993 SCNN1AP37088 669 aa9.27□□□□□ -0.93
HDAC9-205ENST00000411993 CHRNA4P43681 627 aa9.27□□□□□ -0.93
HDAC9-205ENST00000411993 PERM1Q5SV97 790 aa9.27□□□□□ -0.93
HDAC9-205ENST00000411993 FRRS1LQ9P0K9 344 aa9.27□□□□□ -0.93
HDAC9-205ENST00000411993 ZBTB39O15060 712 aa9.26□□□□□ -0.93
HDAC9-205ENST00000411993 SSFA2P28290 1259 aa9.26□□□□□ -0.93
HDAC9-205ENST00000411993 AFF1P51825 1210 aaKnown RBP9.26□□□□□ -0.93
HDAC9-205ENST00000411993 RAC1P63000 192 aa9.26□□□□□ -0.93
HDAC9-205ENST00000411993 NSUN5Q96P11 429 aaKnown RBP9.26□□□□□ -0.93
HDAC9-205ENST00000411993 LPIN3Q9BQK8 851 aa9.26□□□□□ -0.93
HDAC9-205ENST00000411993 MTMR7Q9Y216 660 aa9.26□□□□□ -0.93
HDAC9-205ENST00000411993 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
HDAC9-205ENST00000411993 SOX18P35713 384 aa9.25□□□□□ -0.93
HDAC9-205ENST00000411993 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
HDAC9-205ENST00000411993 GTF3C2Q8WUA4 911 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-205ENST00000411993 NACC1Q96RE7 527 aa9.25□□□□□ -0.93
HDAC9-205ENST00000411993 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
HDAC9-205ENST00000411993 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
HDAC9-205ENST00000411993 GHRHP01286 108 aa9.24□□□□□ -0.93
HDAC9-205ENST00000411993 ATCAYQ86WG3 371 aa9.24□□□□□ -0.93
HDAC9-205ENST00000411993 A0A0A0MRY4 1105 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 PCSK2P16519 638 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 BAG6P46379 1132 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 SIK1P57059 783 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-205ENST00000411993 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-205ENST00000411993 NUDT16Q96DE0 195 aaKnown RBP9.23□□□□□ -0.93
HDAC9-205ENST00000411993 USTQ9Y2C2 406 aa9.23□□□□□ -0.93
HDAC9-205ENST00000411993 J3QW42 95 aa9.22□□□□□ -0.93
HDAC9-205ENST00000411993 GRIK4Q16099 956 aa9.22□□□□□ -0.93
HDAC9-205ENST00000411993 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
HDAC9-205ENST00000411993 MSL1Q68DK7 614 aa9.22□□□□□ -0.93
HDAC9-205ENST00000411993 WFDC8Q8IUA0 241 aa9.22□□□□□ -0.93
HDAC9-205ENST00000411993 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
HDAC9-205ENST00000411993 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-205ENST00000411993 ELNP15502 786 aa9.21□□□□□ -0.94
HDAC9-205ENST00000411993 MPSTP25325 297 aa9.21□□□□□ -0.94
HDAC9-205ENST00000411993 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
HDAC9-205ENST00000411993 TTC16Q8NEE8 873 aa9.21□□□□□ -0.94
HDAC9-205ENST00000411993 EDEM1Q92611 657 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms