RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 IL2RBP14784 551 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 TATP17735 454 aaPredicted RBP11.21□□□□□ -0.61
CCDC196-203ENST00000411796 CHRNA2Q15822 529 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 CCDC184Q52MB2 194 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 WDR63Q8IWG1 891 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
CCDC196-203ENST00000411796 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
CCDC196-203ENST00000411796 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
CCDC196-203ENST00000411796 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
CCDC196-203ENST00000411796 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
CCDC196-203ENST00000411796 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
CCDC196-203ENST00000411796 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
CCDC196-203ENST00000411796 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
CCDC196-203ENST00000411796 IL16Q14005 1332 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 EXOC5O00471 708 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 RGS20O76081 388 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 CD2BP2O95400 341 aaKnown RBP11.19□□□□□ -0.62
CCDC196-203ENST00000411796 TRIM32Q13049 653 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
CCDC196-203ENST00000411796 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
CCDC196-203ENST00000411796 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
CCDC196-203ENST00000411796 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
CCDC196-203ENST00000411796 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
CCDC196-203ENST00000411796 BAP1Q92560 729 aa11.18□□□□□ -0.62
CCDC196-203ENST00000411796 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
CCDC196-203ENST00000411796 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 ZCRB1Q8TBF4 217 aaKnown RBP11.17□□□□□ -0.62
CCDC196-203ENST00000411796 LTN1O94822 1766 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 RGPD1P0DJD0 1748 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 BCL9O00512 1426 aa11.17□□□□□ -0.62
CCDC196-203ENST00000411796 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
CCDC196-203ENST00000411796 ATRNO75882 1429 aa11.16□□□□□ -0.62
CCDC196-203ENST00000411796 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.62
CCDC196-203ENST00000411796 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
CCDC196-203ENST00000411796 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 APAF1O14727 1248 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 RIPK4P57078 832 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 MCM6Q14566 821 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
CCDC196-203ENST00000411796 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
CCDC196-203ENST00000411796 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
CCDC196-203ENST00000411796 DCAF5Q96JK2 942 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 OVOS2A0A0G2JMS6 1433 aa11.15□□□□□ -0.62
CCDC196-203ENST00000411796 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 HMOX1P09601 288 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 SH3BP2P78314 561 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 SKOR1P84550 965 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 DISP2A7MBM2 1401 aa11.14□□□□□ -0.63
CCDC196-203ENST00000411796 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 CT47B1P0C2W7 299 aaPredicted RBP11.13□□□□□ -0.63
CCDC196-203ENST00000411796 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
CCDC196-203ENST00000411796 DDB1Q16531 1140 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
CCDC196-203ENST00000411796 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 ZNF697Q5TEC3 545 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 FKBPLQ9UIM3 349 aa11.13□□□□□ -0.63
CCDC196-203ENST00000411796 PHKG2P15735 406 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 FLIIQ13045 1269 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
CCDC196-203ENST00000411796 ZNF511Q8NB15 262 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 ARMC2Q8NEN0 867 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
CCDC196-203ENST00000411796 E9PSI1 815 aa11.11□□□□□ -0.63
CCDC196-203ENST00000411796 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
CCDC196-203ENST00000411796 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
CCDC196-203ENST00000411796 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
CCDC196-203ENST00000411796 WNT7BP56706 349 aa11.1□□□□□ -0.63
CCDC196-203ENST00000411796 GNAI1P63096 354 aa11.1□□□□□ -0.63
CCDC196-203ENST00000411796 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
CCDC196-203ENST00000411796 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
CCDC196-203ENST00000411796 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
CCDC196-203ENST00000411796 CHL1O00533 1208 aa11.09□□□□□ -0.63
CCDC196-203ENST00000411796 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC196-203ENST00000411796 RC3H1Q5TC82 1133 aaKnown RBP11.09□□□□□ -0.63
CCDC196-203ENST00000411796 FOXJ1Q92949 421 aa11.09□□□□□ -0.63
CCDC196-203ENST00000411796 CCDC9Q9Y3X0 531 aaKnown RBP11.09□□□□□ -0.63
CCDC196-203ENST00000411796 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
CCDC196-203ENST00000411796 CYP27B1O15528 508 aa11.08□□□□□ -0.64
CCDC196-203ENST00000411796 RNMTO43148 476 aaKnown RBP11.08□□□□□ -0.64
CCDC196-203ENST00000411796 FOXC1Q12948 553 aa11.08□□□□□ -0.64
CCDC196-203ENST00000411796 ZNF530Q6P9A1 599 aaPredicted RBP11.08□□□□□ -0.64
CCDC196-203ENST00000411796 FAM196AQ6ZSG2 479 aa11.08□□□□□ -0.64
CCDC196-203ENST00000411796 IL17REQ8NFR9 667 aa11.08□□□□□ -0.64
CCDC196-203ENST00000411796 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms