RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GRIN2CQ14957 1233 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 ECM1Q16610 540 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 NGLY1Q96IV0 654 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 BRD7Q9NPI1 651 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 GGA1Q9UJY5 639 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 SHISA8B8ZZ34 492 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 EPXP11678 715 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 HOXB4P17483 251 aaPredicted RBP7.23□□□□□ -1.25
LSM5-205ENST00000409952 INPP5BP32019 993 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 FCHSD1Q86WN1 690 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 PIK3R5Q8WYR1 880 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.25
LSM5-205ENST00000409952 ENAMQ9NRM1 1142 aa7.23□□□□□ -1.25
LSM5-205ENST00000409952 DNMT3AQ9Y6K1 912 aaPredicted RBP7.23□□□□□ -1.25
LSM5-205ENST00000409952 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 ADH6P28332 368 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 RASSF7Q02833 373 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 DGKZQ13574 1117 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 C11orf91Q3C1V1 193 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 COX20Q5RI15 118 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 XP32Q5T750 250 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 GIMAP6Q6P9H5 292 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 DPH6Q7L8W6 267 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 CEP63Q96MT8 703 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 KLK14Q9P0G3 267 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 KCNH4Q9UQ05 1017 aa7.22□□□□□ -1.25
LSM5-205ENST00000409952 TTBK1Q5TCY1 1321 aaPredicted RBP7.22□□□□□ -1.25
LSM5-205ENST00000409952 PTCD1O75127 700 aaKnown RBP7.21□□□□□ -1.26
LSM5-205ENST00000409952 SIN3BO75182 1162 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 GDF11O95390 407 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
LSM5-205ENST00000409952 CAPN12Q6ZSI9 719 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 GALNT6Q8NCL4 622 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 HIRIP3Q9BW71 556 aaPredicted RBP7.21□□□□□ -1.26
LSM5-205ENST00000409952 EFCC1Q9HA90 598 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 SEPT3Q9UH03 358 aa7.21□□□□□ -1.26
LSM5-205ENST00000409952 NEURL1BA8MQ27 555 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 SPEM2Q0P670 501 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 C9orf131Q5VYM1 1079 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 NOP9Q86U38 636 aaKnown RBP7.2□□□□□ -1.26
LSM5-205ENST00000409952 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 TANGO6Q9C0B7 1094 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 SAP130Q9H0E3 1048 aa7.2□□□□□ -1.26
LSM5-205ENST00000409952 OPLAHO14841 1288 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 MICAL2O94851 1124 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 ITGAEP38570 1179 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 FGD1P98174 961 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 C16orf46Q6P387 395 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 BTBD6Q96KE9 485 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 MKNK1Q9BUB5 465 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
LSM5-205ENST00000409952 IDH3AP50213 366 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 PCBP4P57723 403 aaKnown RBP7.18□□□□□ -1.26
LSM5-205ENST00000409952 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 LDLRAD1Q5T700 205 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 SYT9Q86SS6 491 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 IFT43Q96FT9 208 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 SCARF2Q96GP6 870 aaPredicted RBP7.18□□□□□ -1.26
LSM5-205ENST00000409952 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
LSM5-205ENST00000409952 IRS1P35568 1242 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 ARSDP51689 593 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 TMC7Q7Z402 723 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 METTL16Q86W50 562 aaKnown RBP7.17□□□□□ -1.26
LSM5-205ENST00000409952 NT5DC4Q86YG4 428 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 ETFBKMTQ8IXQ9 262 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 SLC43A3Q8NBI5 491 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 TINF2Q9BSI4 451 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
LSM5-205ENST00000409952 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 RNF225M0QZC1 329 aaPredicted RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 FAM13AO94988 1023 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 EGFRP00533 1210 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 DGKGP49619 791 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 SNRPNP63162 240 aaKnown RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 XPCQ01831 940 aaPredicted RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 FMR1Q06787 632 aaKnown RBP eCLIP7.16□□□□□ -1.26
LSM5-205ENST00000409952 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 TMEM87AQ8NBN3 555 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 NEDD1Q8NHV4 660 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 HELQQ8TDG4 1101 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 DNAJC2Q99543 621 aaKnown RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 LNPKQ9C0E8 428 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 METTL5Q9NRN9 209 aaKnown RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 BRPF3Q9ULD4 1205 aa7.16□□□□□ -1.26
LSM5-205ENST00000409952 TMA7Q9Y2S6 64 aaKnown RBP7.16□□□□□ -1.26
LSM5-205ENST00000409952 TREHO43280 583 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 ITGB2P05107 769 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms