RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 SIPA1L3O60292 1781 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 PPEF1O14829 653 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 ARID5BQ14865 1188 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 FOXD4L5Q5VV16 416 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 FOXD4L4Q8WXT5 416 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 NUDT16Q96DE0 195 aaKnown RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 SLC12A5Q9H2X9 1139 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 R3HCC1Q9Y3T6 440 aaKnown RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 MYBBP1AQ9BQG0 1328 aaKnown RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 FAM173BQ6P4H8 233 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 ZNF428Q96B54 188 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 OTUD5Q96G74 571 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 TRERF1Q96PN7 1200 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 TAF1DQ9H5J8 278 aaPredicted RBP3.95□□□□□ -1.78
RGPD3-202ENST00000409886 PALD1Q9ULE6 856 aa3.95□□□□□ -1.78
RGPD3-202ENST00000409886 SOX10P56693 466 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 PARP3Q9Y6F1 533 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 COL2A1P02458 1487 aaPredicted RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 MYO5AQ9Y4I1 1855 aaKnown RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 PPM1GO15355 546 aaPredicted RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 RRP9O43818 475 aaKnown RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 GADD45BO75293 160 aaPredicted RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 TRIM27P14373 513 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 U2AF2P26368 475 aaKnown RBP eCLIP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 CBX1P83916 185 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 ABTB2Q8N961 1025 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 GPR101Q96P66 508 aaPredicted RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 GOLGA4Q13439 2230 aaKnown RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 CHRM1P11229 460 aaPredicted RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 MSL1Q68DK7 614 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 USP16Q9Y5T5 823 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 PRRC2BQ5JSZ5 2229 aaKnown RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 MFAP1P55081 439 aaKnown RBP3.94□□□□□ -1.78
RGPD3-202ENST00000409886 NOGQ13253 232 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 USP26Q9BXU7 913 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 MYH16Q9H6N6 1097 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 CABP2Q9NPB3 220 aa3.94□□□□□ -1.78
RGPD3-202ENST00000409886 LRMPQ12912 555 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 FBXO46Q6PJ61 603 aaPredicted RBP3.93□□□□□ -1.78
RGPD3-202ENST00000409886 SSH1Q8WYL5 1049 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 LMBRD1Q9NUN5 540 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 CCDC61Q9Y6R9 512 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 CDHR2Q9BYE9 1310 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 E9PSI1 815 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 CHMP4AQ9BY43 222 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 KCNF1Q9H3M0 494 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 DDX21Q9NR30 783 aaKnown RBP eCLIP3.93□□□□□ -1.78
RGPD3-202ENST00000409886 KIF24Q5T7B8 1368 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 ELL2O00472 640 aaPredicted RBP3.93□□□□□ -1.78
RGPD3-202ENST00000409886 ANKRD65E5RJM6 399 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 ZNF609O15014 1411 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 COL25A1Q9BXS0 654 aaPredicted RBP3.93□□□□□ -1.78
RGPD3-202ENST00000409886 EPC1Q9H2F5 836 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 TAOK2Q9UL54 1235 aa3.93□□□□□ -1.78
RGPD3-202ENST00000409886 TMF1P82094 1093 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 FMR1Q06787 632 aaKnown RBP eCLIP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 GRIPAP1Q4V328 841 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 FAM109BQ6ICB4 259 aaPredicted RBP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 NGEFQ8N5V2 710 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 ACSBG1Q96GR2 724 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 PPP1R9BQ96SB3 815 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 NUTM2FA1L443 756 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 OFD1O75665 1012 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 CPA1P15085 419 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 TPRNQ4KMQ1 711 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 LCMT1Q9UIC8 334 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 COL3A1P02461 1466 aaPredicted RBP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 MMP10P09238 476 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 PTPN21Q16825 1174 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 USP50Q70EL3 339 aaPredicted RBP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 ZCCHC17Q9NP64 241 aaKnown RBP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 NRBP1Q9UHY1 535 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 KCNG1Q9UIX4 513 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 PYCARDQ9ULZ3 195 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 V9GYY5 206 aaPredicted RBP3.92□□□□□ -1.78
RGPD3-202ENST00000409886 CACNA1SQ13698 1873 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 SOX12O15370 315 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 FOXK2Q01167 660 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 PGAP2Q9UHJ9 254 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 MGAQ8IWI9 3026 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 PHACTR3Q96KR7 559 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 CFAP44Q96MT7 982 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 ZNF446Q9NWS9 450 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 STK26Q9P289 416 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 TRIM35Q9UPQ4 493 aa3.92□□□□□ -1.78
RGPD3-202ENST00000409886 LAMB2P55268 1798 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 A0A0G2JLW4 131 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 CFAP70Q5T0N1 1121 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 CENPQQ7L2Z9 268 aaPredicted RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 DDX54Q8TDD1 881 aaKnown RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 PCDH11XQ9BZA7 1347 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 PCDH11YQ9BZA8 1340 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 TACC2O95359 2948 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 RBAK-RBAKDNI3L0D1 243 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms