RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 GSDMDP57764 484 aa18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 CYP7A1P22680 504 aa18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
SH3BP4-203ENST00000409212 BMP15O95972 392 aa18.33■□□□□ 0.53
SH3BP4-203ENST00000409212 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.53
SH3BP4-203ENST00000409212 PDCL2Q8N4E4 241 aa18.33■□□□□ 0.53
SH3BP4-203ENST00000409212 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.53
SH3BP4-203ENST00000409212 FEZ1Q99689 392 aa18.33■□□□□ 0.52
SH3BP4-203ENST00000409212 DNAI2Q9GZS0 605 aa18.33■□□□□ 0.52
SH3BP4-203ENST00000409212 ZMYM3Q14202 1370 aa18.33■□□□□ 0.52
SH3BP4-203ENST00000409212 IP6K1Q92551 441 aa18.33■□□□□ 0.52
SH3BP4-203ENST00000409212 ZNF165P49910 485 aa18.33■□□□□ 0.52
SH3BP4-203ENST00000409212 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 YEATS4O95619 227 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 PPP4R3BQ5MIZ7 849 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 ZRSR2Q15696 482 aaKnown RBP18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
SH3BP4-203ENST00000409212 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 VAT1LQ9HCJ6 419 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 NIP7Q9Y221 180 aaKnown RBP eCLIP18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 GNAQP50148 359 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 HOXC9P31274 260 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 SLC4A4Q9Y6R1 1079 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 ABCC2Q92887 1545 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 IDEP14735 1019 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 KCNA6P17658 529 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 TRAF1Q13077 416 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 SNX21Q969T3 373 aa18.31■□□□□ 0.52
SH3BP4-203ENST00000409212 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 BIN1O00499 593 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 NAA16Q6N069 864 aaPredicted RBP18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 CETN1Q12798 172 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
SH3BP4-203ENST00000409212 RAB11FIP4Q86YS3 637 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 NYXQ9GZU5 481 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 PA2G4Q9UQ80 394 aaKnown RBP18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 FAM114A1Q8IWE2 563 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 SIRT1Q96EB6 747 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
SH3BP4-203ENST00000409212 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 URI1O94763 535 aaPredicted RBP18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 RTN1Q16799 776 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 TMCO3Q6UWJ1 677 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 SCLT1Q96NL6 688 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 KIAA0754O94854 1291 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 RLBP1P12271 317 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 IFIT1BQ5T764 474 aaKnown RBP18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 C16orf71Q8IYS4 520 aaPredicted RBP18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 DDX21Q9NR30 783 aaKnown RBP eCLIP18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
SH3BP4-203ENST00000409212 CASQ1P31415 396 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 CCDC102AQ96A19 550 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 MYO1BO43795 1136 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 GNAT2P19087 354 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 TDRD12Q587J7 1177 aaKnown RBP18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 SYKP43405 635 aa18.27■□□□□ 0.52
SH3BP4-203ENST00000409212 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.51
SH3BP4-203ENST00000409212 CCDC40Q4G0X9 1142 aa18.27■□□□□ 0.51
SH3BP4-203ENST00000409212 WDR78Q5VTH9 848 aa18.27■□□□□ 0.51
SH3BP4-203ENST00000409212 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
SH3BP4-203ENST00000409212 Q6ZUG5 572 aa18.26■□□□□ 0.51
SH3BP4-203ENST00000409212 CPLX3Q8WVH0 158 aa18.26■□□□□ 0.51
SH3BP4-203ENST00000409212 TCEANC2Q96MN5 208 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms