RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 SNED1Q8TER0 1413 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 MAP2K2P36507 400 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 SCNN1DP51172 638 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 RALBP1Q15311 655 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 GPC2Q8N158 579 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
NIF3L1-203ENST00000409129 NUP98P52948 1817 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 NTSR2O95665 410 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 EIF2S2P20042 333 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 PDIA6Q15084 440 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 SAPCD2Q86UD0 394 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 CRAMP1Q96RY5 1269 aa12.04□□□□□ -0.48
NIF3L1-203ENST00000409129 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 PARP10Q53GL7 1025 aa12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
NIF3L1-203ENST00000409129 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 CA12O43570 354 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 LMOD1P29536 600 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 VASPP50552 380 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 EIF6P56537 245 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 GLIS2Q9BZE0 524 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.49
NIF3L1-203ENST00000409129 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-203ENST00000409129 ANXA1P04083 346 aa12.01□□□□□ -0.49
NIF3L1-203ENST00000409129 PROSER3Q2NL68 480 aa12.01□□□□□ -0.49
NIF3L1-203ENST00000409129 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
NIF3L1-203ENST00000409129 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-203ENST00000409129 NEUROD2Q15784 382 aa12□□□□□ -0.49
NIF3L1-203ENST00000409129 COPS6Q7L5N1 327 aa12□□□□□ -0.49
NIF3L1-203ENST00000409129 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
NIF3L1-203ENST00000409129 NECTIN2Q92692 538 aa12□□□□□ -0.49
NIF3L1-203ENST00000409129 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
NIF3L1-203ENST00000409129 CHL1O00533 1208 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
NIF3L1-203ENST00000409129 TAF1P21675 1872 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 MYBBP1AQ9BQG0 1328 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 BBOX1O75936 387 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 NLRP10Q86W26 655 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 RUNDC1Q96C34 613 aa11.98□□□□□ -0.49
NIF3L1-203ENST00000409129 ABCC4O15439 1325 aa11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 SUPT20HQ8NEM7 779 aa11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 TRMT112Q9UI30 125 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-203ENST00000409129 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
NIF3L1-203ENST00000409129 AOC3Q16853 763 aa11.96□□□□□ -0.49
NIF3L1-203ENST00000409129 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
NIF3L1-203ENST00000409129 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
NIF3L1-203ENST00000409129 LAMB2P55268 1798 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 SH3TC1Q8TE82 1336 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 SHTN1A0MZ66 631 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 TRPA1O75762 1119 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 MPNDQ8N594 471 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 GPRC5DQ9NZD1 345 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
NIF3L1-203ENST00000409129 FAM155AB1AL88 458 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 HOXB7P09629 217 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 HUNKP57058 714 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 CXCL9Q07325 125 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 NOGQ13253 232 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 GRAPQ13588 217 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 PLBD2Q8NHP8 589 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 GRAPLQ8TC17 118 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms