RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 IFIT1BQ5T764 474 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 STXBP4Q6ZWJ1 553 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 HELBQ8NG08 1087 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 ESR2Q92731 530 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 SPATA32Q96LK8 384 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 IVNS1ABPQ9Y6Y0 642 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 KDM5CP41229 1560 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 SH3TC1Q8TE82 1336 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 ZCCHC11Q5TAX3 1644 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 KIF20AO95235 890 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 NCBP1Q09161 790 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 DHX8Q14562 1220 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 BRDTQ58F21 947 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 TTLL5Q6EMB2 1281 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 TRMT1LQ7Z2T5 733 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 BICD1Q96G01 975 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 TNNT3P45378 269 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 SEPT12Q8IYM1 358 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 NLGN1Q8N2Q7 840 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 CALML4Q96GE6 196 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 SERPINC1P01008 464 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 PDIA4P13667 645 aaKnown RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 PPFIBP1Q86W92 1011 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 ERMNQ8TAM6 284 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 MCM9Q9NXL9 1143 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 NOD1Q9Y239 953 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 CDR1P51861 262 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 WTAPQ15007 396 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC144CPQ8IYA2 1237 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 MAGEB6Q8N7X4 407 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 C8orf76Q96K31 380 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 HCLS1P14317 486 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 HAND2P61296 217 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 ARHGEF6Q15052 776 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 FERMT2Q96AC1 680 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 ARHGEF10LQ9HCE6 1279 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 PLEKHH1Q9ULM0 1364 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 SOS1Q07889 1333 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 ITGA6P23229 1130 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 SLC9C2Q5TAH2 1124 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 LINS1Q8NG48 757 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 ZNF526Q8TF50 670 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 RUFY1Q96T51 708 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 SSR1P43307 286 aaKnown RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 GNAQP50148 359 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 METAP2P50579 478 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 RAB3GAP1Q15042 981 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 DLGAP5Q15398 846 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 NOM1Q5C9Z4 860 aaKnown RBP5.82□□□□□ -1.48
SCN3A-203ENST00000409101 TEX11Q8IYF3 940 aa5.82□□□□□ -1.48
SCN3A-203ENST00000409101 HECW2Q9P2P5 1572 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 AFF2P51816 1311 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 K7ELQ4 463 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC148Q8NFR7 591 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 TNMDQ9H2S6 317 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 GPHNQ9NQX3 736 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 SAP30BPQ9UHR5 308 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 ATF5Q9Y2D1 282 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 MBD3O95983 291 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 PLCD3Q8N3E9 789 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 RRP36Q96EU6 259 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 CSADQ9Y600 493 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 CBFA2T2O43439 604 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 TRIM27P14373 513 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 OTUD7BQ6GQQ9 843 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 HEATR3Q7Z4Q2 680 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 DNAJC10Q8IXB1 793 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 RHPN1Q8TCX5 695 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 IARSP41252 1262 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 AMPD3Q01432 767 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC83Q8IWF9 413 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 SYCP3Q8IZU3 236 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 TMTC2Q8N394 836 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 LRRC27Q9C0I9 530 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 TCP11L1Q9NUJ3 509 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 PUM3Q15397 648 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 MIGA1Q8NAN2 632 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 FAM89AQ96GI7 184 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 AS3MTQ9HBK9 375 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 PAG1Q9NWQ8 432 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 BABAM1Q9NWV8 329 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 SLC5A4Q9NY91 659 aa5.81□□□□□ -1.48
SCN3A-203ENST00000409101 THRAP3Q9Y2W1 955 aaKnown RBP5.81□□□□□ -1.48
SCN3A-203ENST00000409101 RTL9Q8NET4 1388 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CCP110O43303 1012 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 TBCAO75347 108 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 FGFR1OPO95684 399 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 TNFAIP1Q13829 316 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CWF19L2Q2TBE0 894 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC191Q8NCU4 936 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 TSPY26PQ9H489 355 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 DDX21Q9NR30 783 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 SH2B1Q9NRF2 756 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 HMG20BQ9P0W2 317 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 PLEKHG3A1L390 1219 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms