RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GDF11O95390 407 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 MSX1P28360 303 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 FANCCQ00597 558 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 GNL2Q13823 731 aaKnown RBP7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 LRRC69Q6ZNQ3 347 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 SETDB2Q96T68 719 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 TGIF2Q9GZN2 237 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
HMGB3P18-201ENST00000406327 A0A1W2PNR3 127 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 RNF225M0QZC1 329 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 RASSF7Q02833 373 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 NLRP8Q86W28 1048 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 NT5DC4Q86YG4 428 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 CEP63Q96MT8 703 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 C12orf49Q9H741 205 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 ELP3Q9H9T3 547 aa7.37□□□□□ -1.23
HMGB3P18-201ENST00000406327 EGFRP00533 1210 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 TYRO3Q06418 890 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 LBRQ14739 615 aaKnown RBP7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 LDLRAD1Q5T700 205 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 UBXN4Q92575 508 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 FAM8A1Q9UBU6 413 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
HMGB3P18-201ENST00000406327 A6NHS1 94 aa7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 XYLBO75191 536 aa7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 F11P03951 625 aa7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 METTL16Q86W50 562 aaKnown RBP7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 ABI2Q9NYB9 513 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 KCNMB2Q9Y691 235 aa7.35□□□□□ -1.23
HMGB3P18-201ENST00000406327 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 TRIP4Q15650 581 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 TTC39BQ5VTQ0 682 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 NLRP13Q86W25 1043 aa7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 RNF19AQ9NV58 838 aa7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P18-201ENST00000406327 SOBPA7XYQ1 873 aa7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 RHOQP17081 205 aa7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 ST13P50502 369 aaKnown RBP7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 RAD51AP2Q09MP3 1159 aa7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 C9orf131Q5VYM1 1079 aa7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 SLC43A3Q8NBI5 491 aa7.33□□□□□ -1.24
HMGB3P18-201ENST00000406327 LOC105371045A0A1W2PR82 267 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 GADD45BO75293 160 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 KCNQ4P56696 695 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 GALNT12Q8IXK2 581 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 TRAK1Q9UPV9 953 aa7.32□□□□□ -1.24
HMGB3P18-201ENST00000406327 EDN3P14138 238 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 CES1P23141 567 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 TAF1CQ15572 869 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 ZNF654Q8IZM8 581 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 EPS8L3Q8TE67 593 aaKnown RBP7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 TMEM63CQ9P1W3 806 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
HMGB3P18-201ENST00000406327 FIGNL2A6NMB9 653 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 MAN1A2O60476 641 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 CTSHP09668 335 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 FAM157BP0CG42 384 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 GSTT1P30711 240 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 PTPN12Q05209 780 aaKnown RBP7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 GAS2L1Q99501 681 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 ADAMTS8Q9UP79 889 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 USP31Q70CQ4 1352 aa7.3□□□□□ -1.24
HMGB3P18-201ENST00000406327 H7C1W4 665 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 USP48Q86UV5 1035 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 TINF2Q9BSI4 451 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 TANGO6Q9C0B7 1094 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 CAPN10Q9HC96 672 aa7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 PPP1R1BQ9UD71 204 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P18-201ENST00000406327 ATXN7O15265 892 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 IGHA1P01876 353 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 XRCC5P13010 732 aaKnown RBP7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 CCINQ13939 588 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 KIAA0319Q5VV43 1072 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms