RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 KDM4AO75164 1064 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 CHGBP05060 677 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 CKAP2LQ8IYA6 745 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 TOPAZ1Q8N9V7 1692 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 F13A1P00488 732 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 ME3Q16798 604 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 DDX46Q7L014 1031 aaKnown RBP17.8■□□□□ 0.44
ATG4B-206ENST00000405546 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 TFCP2Q12800 502 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 GCKRQ14397 625 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 IFNL2Q8IZJ0 200 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 CCDC183Q5T5S1 534 aa17.8■□□□□ 0.44
ATG4B-206ENST00000405546 PSMA5P28066 241 aa17.79■□□□□ 0.44
ATG4B-206ENST00000405546 ZBTB9Q96C00 473 aa17.79■□□□□ 0.44
ATG4B-206ENST00000405546 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
ATG4B-206ENST00000405546 LETM1O95202 739 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-206ENST00000405546 CEBPZQ03701 1054 aaKnown RBP17.79■□□□□ 0.44
ATG4B-206ENST00000405546 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-206ENST00000405546 LUZP1Q86V48 1076 aa17.79■□□□□ 0.44
ATG4B-206ENST00000405546 TTC14Q96N46 770 aa17.79■□□□□ 0.44
ATG4B-206ENST00000405546 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
ATG4B-206ENST00000405546 ERBB3P21860 1342 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 PXDNQ92626 1479 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
ATG4B-206ENST00000405546 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
ATG4B-206ENST00000405546 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 HIP1O00291 1037 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 CCDC186Q7Z3E2 898 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 TAF6LQ9Y6J9 622 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 NPHP3Q7Z494 1330 aa17.78■□□□□ 0.44
ATG4B-206ENST00000405546 SLC27A2O14975 620 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-206ENST00000405546 SYTL4Q96C24 671 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-206ENST00000405546 ST7Q9NRC1 585 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 NALCNQ8IZF0 1738 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
ATG4B-206ENST00000405546 KIF20AO95235 890 aa17.77■□□□□ 0.43
ATG4B-206ENST00000405546 PHKG2P15735 406 aa17.77■□□□□ 0.43
ATG4B-206ENST00000405546 MTX1Q13505 466 aa17.77■□□□□ 0.43
ATG4B-206ENST00000405546 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-206ENST00000405546 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 FMNL2Q96PY5 1086 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 PDIA6Q15084 440 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 METTL22Q9BUU2 404 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-206ENST00000405546 NCBP1Q09161 790 aaKnown RBP17.76■□□□□ 0.43
ATG4B-206ENST00000405546 STRN4Q9NRL3 753 aa17.76■□□□□ 0.43
ATG4B-206ENST00000405546 TIMM10P62072 90 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 UBE2HP62256 183 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 SLFNL1Q499Z3 407 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 TMEM51Q9NW97 253 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 H3BQV1 296 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-206ENST00000405546 TCHHQ07283 1943 aa17.75■□□□□ 0.43
ATG4B-206ENST00000405546 TNNT1P13805 278 aa17.74■□□□□ 0.43
ATG4B-206ENST00000405546 GTF2F1P35269 517 aaKnown RBP eCLIP17.74■□□□□ 0.432e-8■■■■■ 34.1
ATG4B-206ENST00000405546 MTMR6Q9Y217 621 aa17.74■□□□□ 0.43
ATG4B-206ENST00000405546 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 GOLIM4O00461 696 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 FAM184AQ8NB25 1140 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
ATG4B-206ENST00000405546 RPAP1Q9BWH6 1393 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-206ENST00000405546 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 A0A087WWV3 80 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 CDC37L1Q7L3B6 337 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 SPTLC3Q9NUV7 552 aa17.73■□□□□ 0.43
ATG4B-206ENST00000405546 CYP27B1O15528 508 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 A1BGP04217 495 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 KRT85P78386 507 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 TNNI3KQ59H18 835 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-206ENST00000405546 TRIM5Q9C035 493 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 TRMT1Q9NXH9 659 aaKnown RBP17.72■□□□□ 0.43
ATG4B-206ENST00000405546 FPGT-TNNI3KV9GXZ4 949 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 TPD52L1Q16890 204 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-206ENST00000405546 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
ATG4B-206ENST00000405546 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATG4B-206ENST00000405546 ARID5BQ14865 1188 aa17.71■□□□□ 0.43
ATG4B-206ENST00000405546 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
ATG4B-206ENST00000405546 EPB41L2O43491 1005 aaKnown RBP17.71■□□□□ 0.43
ATG4B-206ENST00000405546 CHST3Q7LGC8 479 aa17.71■□□□□ 0.43
ATG4B-206ENST00000405546 FER1L4A9Z1Z3 1794 aa17.71■□□□□ 0.43
ATG4B-206ENST00000405546 DCAF5Q96JK2 942 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms