RNA–Protein interactions for RNA: ENST00000405384.6

ATL2-203, Transcript of atlastin GTPase 2, humanhuman

TSL 1 (best)

Gene ATL2, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-203ENST00000405384 LMBR1LQ6UX01 489 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 H0YIN7 160 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 SRGNP10124 158 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
ATL2-203ENST00000405384 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
ATL2-203ENST00000405384 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
ATL2-203ENST00000405384 CSF1RP07333 972 aa16.91■□□□□ 0.3
ATL2-203ENST00000405384 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
ATL2-203ENST00000405384 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
ATL2-203ENST00000405384 SYT17Q9BSW7 474 aa16.91■□□□□ 0.3
ATL2-203ENST00000405384 GREM2Q9H772 168 aa16.91■□□□□ 0.3
ATL2-203ENST00000405384 KCNA3P22001 575 aa16.9■□□□□ 0.3
ATL2-203ENST00000405384 TGFB2P61812 414 aa16.9■□□□□ 0.3
ATL2-203ENST00000405384 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
ATL2-203ENST00000405384 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.31e-9■■□□□ 12
ATL2-203ENST00000405384 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
ATL2-203ENST00000405384 RABL6Q3YEC7 729 aaPredicted RBP16.9■□□□□ 0.3
ATL2-203ENST00000405384 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.3
ATL2-203ENST00000405384 MYH3P11055 1940 aa16.89■□□□□ 0.3
ATL2-203ENST00000405384 NPR1P16066 1061 aa16.89■□□□□ 0.29
ATL2-203ENST00000405384 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
ATL2-203ENST00000405384 COL4A1P02462 1669 aa16.88■□□□□ 0.29
ATL2-203ENST00000405384 HDAC5Q9UQL6 1122 aa16.88■□□□□ 0.29
ATL2-203ENST00000405384 ITGA6P23229 1130 aa16.88■□□□□ 0.29
ATL2-203ENST00000405384 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
ATL2-203ENST00000405384 DDX46Q7L014 1031 aaKnown RBP16.88■□□□□ 0.29
ATL2-203ENST00000405384 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
ATL2-203ENST00000405384 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
ATL2-203ENST00000405384 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
ATL2-203ENST00000405384 TAF1P21675 1872 aa16.88■□□□□ 0.29
ATL2-203ENST00000405384 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
ATL2-203ENST00000405384 SLC51AQ86UW1 340 aa16.87■□□□□ 0.29
ATL2-203ENST00000405384 CELF1Q92879 486 aaKnown RBP16.87■□□□□ 0.29
ATL2-203ENST00000405384 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
ATL2-203ENST00000405384 CEP85Q6P2H3 762 aa16.86■□□□□ 0.29
ATL2-203ENST00000405384 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
ATL2-203ENST00000405384 IFIT5Q13325 482 aaKnown RBP16.86■□□□□ 0.29
ATL2-203ENST00000405384 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
ATL2-203ENST00000405384 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
ATL2-203ENST00000405384 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
ATL2-203ENST00000405384 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
ATL2-203ENST00000405384 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
ATL2-203ENST00000405384 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
ATL2-203ENST00000405384 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
ATL2-203ENST00000405384 ANKRD18BA2A2Z9 1011 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 ATP8B2P98198 1209 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 MTX1Q13505 466 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 GRAPQ13588 217 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
ATL2-203ENST00000405384 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
ATL2-203ENST00000405384 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
ATL2-203ENST00000405384 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
ATL2-203ENST00000405384 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
ATL2-203ENST00000405384 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
ATL2-203ENST00000405384 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
ATL2-203ENST00000405384 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
ATL2-203ENST00000405384 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 ANKRD18AQ8IVF6 992 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
ATL2-203ENST00000405384 NEFLP07196 543 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 DALRD3Q5D0E6 543 aaKnown RBP16.82■□□□□ 0.28
ATL2-203ENST00000405384 BCS1LQ9Y276 419 aa16.82■□□□□ 0.28
ATL2-203ENST00000405384 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
ATL2-203ENST00000405384 POLA2Q14181 598 aa16.81■□□□□ 0.28
ATL2-203ENST00000405384 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
ATL2-203ENST00000405384 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
ATL2-203ENST00000405384 BRCA1P38398 1863 aaKnown RBP16.81■□□□□ 0.28
ATL2-203ENST00000405384 BBOX1O75936 387 aa16.8■□□□□ 0.28
ATL2-203ENST00000405384 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
ATL2-203ENST00000405384 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
ATL2-203ENST00000405384 SIL1Q9H173 461 aa16.8■□□□□ 0.28
ATL2-203ENST00000405384 C21orf2O43822 256 aa16.8■□□□□ 0.28
ATL2-203ENST00000405384 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
ATL2-203ENST00000405384 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
ATL2-203ENST00000405384 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
ATL2-203ENST00000405384 LRRC24Q50LG9 513 aa16.79■□□□□ 0.28
ATL2-203ENST00000405384 LDHAL6AQ6ZMR3 332 aa16.79■□□□□ 0.28
ATL2-203ENST00000405384 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
ATL2-203ENST00000405384 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
ATL2-203ENST00000405384 AAMPQ13685 434 aa16.78■□□□□ 0.28
ATL2-203ENST00000405384 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATL2-203ENST00000405384 COPRSQ9NQ92 184 aa16.78■□□□□ 0.28
ATL2-203ENST00000405384 CNNM1Q9NRU3 951 aa16.78■□□□□ 0.28
ATL2-203ENST00000405384 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
ATL2-203ENST00000405384 SP8Q8IXZ3 490 aa16.77■□□□□ 0.28
ATL2-203ENST00000405384 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
ATL2-203ENST00000405384 HMMRO75330 724 aa16.76■□□□□ 0.27
ATL2-203ENST00000405384 HELBQ8NG08 1087 aaPredicted RBP16.76■□□□□ 0.27
ATL2-203ENST00000405384 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms