RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 EIF2S2P20042 333 aaKnown RBP23.45■■□□□ 1.34
HDAC11-204ENST00000404040 GMPSP49915 693 aaPredicted RBP23.45■■□□□ 1.34
HDAC11-204ENST00000404040 ANXA1P04083 346 aa23.44■■□□□ 1.34
HDAC11-204ENST00000404040 DPP8Q6V1X1 898 aaPredicted RBP23.44■■□□□ 1.34
HDAC11-204ENST00000404040 BBOX1O75936 387 aa23.43■■□□□ 1.34
HDAC11-204ENST00000404040 KIAA2012Q0VF49 1180 aa23.43■■□□□ 1.34
HDAC11-204ENST00000404040 SAPCD2Q86UD0 394 aa23.43■■□□□ 1.34
HDAC11-204ENST00000404040 SP8Q8IXZ3 490 aa23.43■■□□□ 1.34
HDAC11-204ENST00000404040 MAP2K2P36507 400 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 CIAPIN1Q6FI81 312 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 NLRP10Q86W26 655 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 MPNDQ8N594 471 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 GLIS2Q9BZE0 524 aaPredicted RBP23.42■■□□□ 1.34
HDAC11-204ENST00000404040 BABAM1Q9NWV8 329 aa23.42■■□□□ 1.34
HDAC11-204ENST00000404040 AOC2O75106 756 aa23.41■■□□□ 1.34
HDAC11-204ENST00000404040 CELF2O95319 508 aaKnown RBP23.41■■□□□ 1.34
HDAC11-204ENST00000404040 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
HDAC11-204ENST00000404040 PGAP2Q9UHJ9 254 aa23.41■■□□□ 1.34
HDAC11-204ENST00000404040 FAM161AQ3B820 660 aa23.4■■□□□ 1.34
HDAC11-204ENST00000404040 HHIPL1Q96JK4 782 aa23.4■■□□□ 1.34
HDAC11-204ENST00000404040 SH3TC1Q8TE82 1336 aa23.39■■□□□ 1.34
HDAC11-204ENST00000404040 COL4A1P02462 1669 aa23.39■■□□□ 1.34
HDAC11-204ENST00000404040 RAD17O75943 681 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 RIPK4P57078 832 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 GRAPQ13588 217 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 TNIP1Q15025 636 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 DDX46Q7L014 1031 aaKnown RBP23.39■■□□□ 1.33
HDAC11-204ENST00000404040 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 GRAPLQ8TC17 118 aaPredicted RBP23.39■■□□□ 1.33
HDAC11-204ENST00000404040 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 ZC3H15Q8WU90 426 aaKnown RBP23.39■■□□□ 1.33
HDAC11-204ENST00000404040 TSKSQ9UJT2 592 aa23.39■■□□□ 1.33
HDAC11-204ENST00000404040 SCN9AQ15858 1988 aa23.38■■□□□ 1.33
HDAC11-204ENST00000404040 TRPM4Q8TD43 1214 aa23.38■■□□□ 1.33
HDAC11-204ENST00000404040 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
HDAC11-204ENST00000404040 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 CA12O43570 354 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
HDAC11-204ENST00000404040 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
HDAC11-204ENST00000404040 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 TRMT112Q9UI30 125 aaKnown RBP23.37■■□□□ 1.33
HDAC11-204ENST00000404040 PSME4Q14997 1843 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 AKAP11Q9UKA4 1901 aa23.37■■□□□ 1.33
HDAC11-204ENST00000404040 BRPF1P55201 1214 aaPredicted RBP23.36■■□□□ 1.33
HDAC11-204ENST00000404040 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
HDAC11-204ENST00000404040 SHTN1A0MZ66 631 aa23.35■■□□□ 1.33
HDAC11-204ENST00000404040 TMPOP42166 694 aaKnown RBP23.35■■□□□ 1.33
HDAC11-204ENST00000404040 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDAC11-204ENST00000404040 ZNF408Q9H9D4 720 aa23.35■■□□□ 1.33
HDAC11-204ENST00000404040 PDE4DIPQ5VU43 2346 aa23.34■■□□□ 1.33
HDAC11-204ENST00000404040 CCDC85CA6NKD9 419 aa23.34■■□□□ 1.33
HDAC11-204ENST00000404040 CDC37L1Q7L3B6 337 aa23.34■■□□□ 1.33
HDAC11-204ENST00000404040 CNOT7Q9UIV1 285 aaKnown RBP23.34■■□□□ 1.33
HDAC11-204ENST00000404040 MICALL2Q8IY33 904 aa23.33■■□□□ 1.33
HDAC11-204ENST00000404040 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
HDAC11-204ENST00000404040 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
HDAC11-204ENST00000404040 H7C1D1 291 aa23.31■■□□□ 1.32
HDAC11-204ENST00000404040 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
HDAC11-204ENST00000404040 RGS19P49795 217 aa23.3■■□□□ 1.32
HDAC11-204ENST00000404040 DPF2Q92785 391 aa23.3■■□□□ 1.32
HDAC11-204ENST00000404040 CCER2I3L3R5 266 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 PSMD14O00487 310 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 CHL1O00533 1208 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 MLLT1Q03111 559 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-204ENST00000404040 NOGQ13253 232 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
HDAC11-204ENST00000404040 ZBTB12Q9Y330 459 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-204ENST00000404040 SLC34A2O95436 690 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 WASHC4Q2M389 1173 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 USP48Q86UV5 1035 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
HDAC11-204ENST00000404040 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 MCOLN1Q9GZU1 580 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
HDAC11-204ENST00000404040 HUNKP57058 714 aa23.27■■□□□ 1.32
HDAC11-204ENST00000404040 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
HDAC11-204ENST00000404040 SAMD7Q7Z3H4 446 aa23.27■■□□□ 1.32
HDAC11-204ENST00000404040 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
HDAC11-204ENST00000404040 HOXB7P09629 217 aa23.26■■□□□ 1.31
HDAC11-204ENST00000404040 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
HDAC11-204ENST00000404040 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
HDAC11-204ENST00000404040 ZIC5Q96T25 663 aa23.26■■□□□ 1.31
HDAC11-204ENST00000404040 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
HDAC11-204ENST00000404040 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-204ENST00000404040 EGFRP00533 1210 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
HDAC11-204ENST00000404040 GPSM2P81274 684 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-204ENST00000404040 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 KRT26Q7Z3Y9 468 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 MYH3P11055 1940 aa23.25■■□□□ 1.31
HDAC11-204ENST00000404040 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
HDAC11-204ENST00000404040 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
HDAC11-204ENST00000404040 ECE2O60344 883 aa23.24■■□□□ 1.31
HDAC11-204ENST00000404040 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms