RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 H3BQV1 296 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 PSMA5P28066 241 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 BRF1Q92994 677 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
RBM39-206ENST00000403542 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 CCT2P78371 535 aaKnown RBP14.2□□□□□ -0.14
RBM39-206ENST00000403542 RNF20Q5VTR2 975 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 TM6SF1Q9BZW5 370 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 DBNLQ9UJU6 430 aaKnown RBP14.2□□□□□ -0.14
RBM39-206ENST00000403542 HOXB7P09629 217 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 Q6ZUG5 572 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
RBM39-206ENST00000403542 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
RBM39-206ENST00000403542 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 DBNDD2Q9BQY9 259 aa14.2□□□□□ -0.14
RBM39-206ENST00000403542 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
RBM39-206ENST00000403542 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
RBM39-206ENST00000403542 KIAA1524Q8TCG1 905 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 FAM200AQ8TCP9 573 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 USP16Q9Y5T5 823 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 LRRC37A3O60309 1634 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 NEXNQ0ZGT2 675 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 PDIA6Q15084 440 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 PGBD1Q96JS3 809 aa14.19□□□□□ -0.14
RBM39-206ENST00000403542 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
RBM39-206ENST00000403542 TAF5LO75529 589 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 COL15A1P39059 1388 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 NEURL1BA8MQ27 555 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 PPP4R3BQ5MIZ7 849 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 RAB11FIP4Q86YS3 637 aa14.18□□□□□ -0.14
RBM39-206ENST00000403542 DDX21Q9NR30 783 aaKnown RBP eCLIP14.18□□□□□ -0.14
RBM39-206ENST00000403542 IGSF3O75054 1194 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 NAA30Q147X3 362 aaPredicted RBP14.17□□□□□ -0.14
RBM39-206ENST00000403542 ZNF496Q96IT1 587 aaPredicted RBP14.17□□□□□ -0.14
RBM39-206ENST00000403542 ZHX1Q9UKY1 873 aaPredicted RBP14.17□□□□□ -0.14
RBM39-206ENST00000403542 PDCP20941 246 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 ZNF165P49910 485 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 GCKRQ14397 625 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 MAP7D2Q96T17 732 aa14.17□□□□□ -0.14
RBM39-206ENST00000403542 CYP21A2P08686 494 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 AMOTQ4VCS5 1084 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 CABLES1Q8TDN4 633 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 NPHP4O75161 1426 aaPredicted RBP14.16□□□□□ -0.14
RBM39-206ENST00000403542 RGPD2P0DJD1 1756 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 TIMM10P62072 90 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 APOBRQ0VD83 1088 aa14.16□□□□□ -0.14
RBM39-206ENST00000403542 CHAF1AQ13111 956 aaPredicted RBP14.16□□□□□ -0.14
RBM39-206ENST00000403542 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
RBM39-206ENST00000403542 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 HIP1O00291 1037 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 GOLIM4O00461 696 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
RBM39-206ENST00000403542 ARHGEF25Q86VW2 580 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 KCNB2Q92953 911 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 PRIMPOLQ96LW4 560 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
RBM39-206ENST00000403542 SPTLC3Q9NUV7 552 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 CACNA1FO60840 1977 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 A0A087WZG4 1122 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 ATP2B3Q16720 1220 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
RBM39-206ENST00000403542 ZNF330Q9Y3S2 320 aaPredicted RBP14.15□□□□□ -0.14
RBM39-206ENST00000403542 SCRN1Q12765 414 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 ANKRD1Q15327 319 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 HSP90AB3PQ58FF7 597 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 TNNI3KQ59H18 835 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 FPGT-TNNI3KV9GXZ4 949 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 CCDC144BQ3MJ40 725 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 CCDC144CPQ8IYA2 1237 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 GTF3C6Q969F1 213 aa14.14□□□□□ -0.15
RBM39-206ENST00000403542 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
RBM39-206ENST00000403542 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.152e-8■■□□□ 13.9
RBM39-206ENST00000403542 PTPN12Q05209 780 aaKnown RBP14.13□□□□□ -0.15
RBM39-206ENST00000403542 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
RBM39-206ENST00000403542 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
RBM39-206ENST00000403542 GPHNQ9NQX3 736 aaPredicted RBP14.13□□□□□ -0.15
RBM39-206ENST00000403542 CLIP2Q9UDT6 1046 aa14.13□□□□□ -0.15
RBM39-206ENST00000403542 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
RBM39-206ENST00000403542 ZNF594Q96JF6 807 aaPredicted RBP14.13□□□□□ -0.15
RBM39-206ENST00000403542 CCDC94Q9BW85 323 aaPredicted RBP14.13□□□□□ -0.15
RBM39-206ENST00000403542 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
RBM39-206ENST00000403542 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
RBM39-206ENST00000403542 CLSTN2Q9H4D0 955 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms