RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 IMPACTQ9P2X3 320 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 TRAK1Q9UPV9 953 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 ELL2O00472 640 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 EIF3JO75822 258 aaKnown RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 SFPQP23246 707 aaKnown RBP eCLIP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 GPTP24298 496 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 PPP2R3AQ06190 1150 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 VEZTQ9HBM0 779 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 BSDC1Q9NW68 430 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 MCM8Q9UJA3 840 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 NPHP3Q7Z494 1330 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 ATP10DQ9P241 1426 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 TRAPPC8Q9Y2L5 1435 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 ARHGEF40Q8TER5 1519 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 HSPA4P34932 840 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 IRX1P78414 480 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 BEND6Q5SZJ8 279 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 CEP85Q6P2H3 762 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 DHX40Q8IX18 779 aaKnown RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 N4BP2L2Q92802 583 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 CLIC6Q96NY7 704 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 TFIP11Q9UBB9 837 aaKnown RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 SSH2Q76I76 1423 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 TXLNAP40222 546 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 HNRNPMP52272 730 aaKnown RBP eCLIP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 MAP3K9P80192 1104 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
RETREG1-202ENST00000399793 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 SPATA32Q96LK8 384 aa10.11□□□□□ -0.79
RETREG1-202ENST00000399793 ERCC3P19447 782 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 TMC6Q7Z403 805 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 FAM177A1Q8N128 213 aaPredicted RBP10.1□□□□□ -0.79
RETREG1-202ENST00000399793 BICD2Q8TD16 824 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 RILPL2Q969X0 211 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 FAM204AQ9H8W3 233 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
RETREG1-202ENST00000399793 A0A087WWV3 80 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 CCP110O43303 1012 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 GCFC2P16383 781 aaKnown RBP10.1□□□□□ -0.79
RETREG1-202ENST00000399793 STX1AQ16623 288 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 WWC2Q6AWC2 1192 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 NBPF5PQ86XG9 351 aaPredicted RBP10.1□□□□□ -0.79
RETREG1-202ENST00000399793 FAM71BQ8TC56 605 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 ITFG2Q969R8 447 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 CCDC102AQ96A19 550 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 API5Q9BZZ5 524 aaKnown RBP10.1□□□□□ -0.79
RETREG1-202ENST00000399793 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 SUGCTQ9HAC7 445 aa10.1□□□□□ -0.79
RETREG1-202ENST00000399793 NRDCO43847 1150 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 TBC1D8BQ0IIM8 1120 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 IL25Q9H293 177 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 FAM169AQ9Y6X4 670 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 RAPGEF6Q8TEU7 1601 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 HSP90B2PQ58FF3 399 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 FMNL3Q8IVF7 1028 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 HNRNPLLQ8WVV9 542 aaKnown RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 PGBD1Q96JS3 809 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 SCAND2PQ9GZW5 306 aaPredicted RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 FANCAO15360 1455 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 PTPRTO14522 1441 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 CPA1P15085 419 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 NF2P35240 595 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 CDC37L1Q7L3B6 337 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
RETREG1-202ENST00000399793 DDX11Q96FC9 970 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 CABS1Q96KC9 395 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 CD248Q9HCU0 757 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 TERF2IPQ9NYB0 399 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 SNX14Q9Y5W7 946 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 MRFAP1Q9Y605 127 aa10.09□□□□□ -0.79
RETREG1-202ENST00000399793 TTC36A6NLP5 189 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 DDR1Q08345 913 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 AOPEPQ8N6M6 819 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 ZKSCAN4Q969J2 545 aaPredicted RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 MPHOSPH8Q99549 860 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 TRIM6Q9C030 488 aaPredicted RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 CCT5P48643 541 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 OS9Q13438 667 aaPredicted RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 ZC3H12AQ5D1E8 599 aaKnown RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 ZNF526Q8TF50 670 aaPredicted RBP10.08□□□□□ -0.8
RETREG1-202ENST00000399793 TATDN2Q93075 761 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 WDR24Q96S15 920 aa10.08□□□□□ -0.8
RETREG1-202ENST00000399793 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
RETREG1-202ENST00000399793 INPP5BP32019 993 aa10.07□□□□□ -0.8
RETREG1-202ENST00000399793 PSME1Q06323 249 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms