RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 KIAA1328Q86T90 577 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 PTPRCP08575 1304 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 ERCC4Q92889 916 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 ATP2B3Q16720 1220 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 FSIP1Q8NA03 581 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
PCDHGA8-201ENST00000398604 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 LDHCP07864 332 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 CBFA2T2O43439 604 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 CNNM3Q8NE01 707 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 FAM135BQ49AJ0 1406 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 BAG3O95817 575 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 CYP7A1P22680 504 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
PCDHGA8-201ENST00000398604 SDSP20132 328 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 GJB2P29033 226 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 CCP110O43303 1012 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 GCP02774 474 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 TNIP1Q15025 636 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 MADDQ8WXG6 1647 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 TNNT1P13805 278 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 FLT4P35916 1363 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 GRM8O00222 908 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 PICALMQ13492 652 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 TRMT1Q9NXH9 659 aaKnown RBP13.36□□□□□ -0.27
PCDHGA8-201ENST00000398604 A0A1W2PP64 1363 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 UBA7P41226 1012 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 USP8P40818 1118 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 ZMYM4Q5VZL5 1548 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 CCDC152Q4G0S7 254 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 CUL5Q93034 780 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 EYA1Q99502 592 aa13.35□□□□□ -0.27
PCDHGA8-201ENST00000398604 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 PDE4BQ07343 736 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 WDHD1O75717 1129 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 ERLIN2O94905 339 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 SLAIN2Q9P270 581 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 STX6O43752 255 aa13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 SEPT7Q16181 437 aaKnown RBP13.34□□□□□ -0.27
PCDHGA8-201ENST00000398604 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.27
PCDHGA8-201ENST00000398604 ANO10Q9NW15 660 aa13.33□□□□□ -0.27
PCDHGA8-201ENST00000398604 RAB34Q9BZG1 259 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 PDE1AP54750 535 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 TTC22Q5TAA0 569 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 SYNMO15061 1565 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 NEBLO76041 1014 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
PCDHGA8-201ENST00000398604 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
PCDHGA8-201ENST00000398604 TAF4BQ92750 862 aa13.32□□□□□ -0.28
PCDHGA8-201ENST00000398604 METP08581 1390 aa13.32□□□□□ -0.28
PCDHGA8-201ENST00000398604 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms