RNA–Protein interactions for RNA: ENST00000398048.4

SCML2-202, Transcript of Scm polycomb group protein like 2, humanhuman

TSL 1 (best) BASIC

Gene SCML2, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2-202ENST00000398048 PCGF6Q9BYE7 350 aa9.22□□□□□ -0.93
SCML2-202ENST00000398048 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
SCML2-202ENST00000398048 USP19O94966 1318 aa9.21□□□□□ -0.93
SCML2-202ENST00000398048 RGS12O14924 1447 aa9.21□□□□□ -0.93
SCML2-202ENST00000398048 CHRNA2Q15822 529 aa9.21□□□□□ -0.94
SCML2-202ENST00000398048 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
SCML2-202ENST00000398048 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
SCML2-202ENST00000398048 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
SCML2-202ENST00000398048 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 USP32Q8NFA0 1604 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 WIPF1O43516 503 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 TMF1P82094 1093 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 USP6P35125 1406 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
SCML2-202ENST00000398048 RGPD8O14715 1765 aaPredicted RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 MCCD1P59942 119 aaPredicted RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 PDE3BQ13370 1112 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 INTS6LQ5JSJ4 861 aaKnown RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 Q6ZVU0 165 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 TESK2Q96S53 571 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 CDCA7Q9BWT1 371 aaPredicted RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 PRM3Q9NNZ6 103 aa9.19□□□□□ -0.94
SCML2-202ENST00000398048 CPSF1Q10570 1443 aaKnown RBP9.19□□□□□ -0.94
SCML2-202ENST00000398048 ARHGEF28Q8N1W1 1705 aaKnown RBP9.18□□□□□ -0.94
SCML2-202ENST00000398048 NINLQ9Y2I6 1382 aa9.18□□□□□ -0.94
SCML2-202ENST00000398048 H3BM21 787 aa9.18□□□□□ -0.94
SCML2-202ENST00000398048 RAB15P59190 212 aa9.17□□□□□ -0.94
SCML2-202ENST00000398048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.94
SCML2-202ENST00000398048 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
SCML2-202ENST00000398048 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 BAG6P46379 1132 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
SCML2-202ENST00000398048 CBLBQ13191 982 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCML2-202ENST00000398048 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
SCML2-202ENST00000398048 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 NDUFB9Q9Y6M9 179 aa9.16□□□□□ -0.94
SCML2-202ENST00000398048 VEGFBP49765 207 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 RNF20Q5VTR2 975 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 TOM1L2Q6ZVM7 507 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 TRPM1Q7Z4N2 1603 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 ALS2Q96Q42 1657 aa9.15□□□□□ -0.94
SCML2-202ENST00000398048 ITSN1Q15811 1721 aa9.15□□□□□ -0.95
SCML2-202ENST00000398048 TRPM3Q9HCF6 1732 aaPredicted RBP9.15□□□□□ -0.95
SCML2-202ENST00000398048 EXOC5O00471 708 aa9.14□□□□□ -0.95
SCML2-202ENST00000398048 SPINT1O43278 529 aa9.14□□□□□ -0.95
SCML2-202ENST00000398048 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
SCML2-202ENST00000398048 NWD2Q9ULI1 1742 aa9.14□□□□□ -0.95
SCML2-202ENST00000398048 WDR17Q8IZU2 1322 aa9.14□□□□□ -0.95
SCML2-202ENST00000398048 COL14A1Q05707 1796 aaKnown RBP9.14□□□□□ -0.95
SCML2-202ENST00000398048 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
SCML2-202ENST00000398048 MARF1Q9Y4F3 1742 aaKnown RBP9.13□□□□□ -0.95
SCML2-202ENST00000398048 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 ESPNB1AK53 854 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 CSB-PGBD3P0DP91 1061 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 FLIIQ13045 1269 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 COG3Q96JB2 828 aa9.13□□□□□ -0.95
SCML2-202ENST00000398048 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCML2-202ENST00000398048 RELBQ01201 579 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 NR1H3Q13133 447 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 DDB1Q16531 1140 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 NME9Q86XW9 330 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
SCML2-202ENST00000398048 IP6K1Q92551 441 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 CRB1P82279 1406 aa9.12□□□□□ -0.95
SCML2-202ENST00000398048 EDC4Q6P2E9 1401 aaKnown RBP9.12□□□□□ -0.95
SCML2-202ENST00000398048 GLI3P10071 1580 aa9.11□□□□□ -0.95
SCML2-202ENST00000398048 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
SCML2-202ENST00000398048 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
SCML2-202ENST00000398048 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
SCML2-202ENST00000398048 USP47Q96K76 1375 aa9.11□□□□□ -0.95
SCML2-202ENST00000398048 EP400Q96L91 3159 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 FYB1O15117 783 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 APBA3O96018 575 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 ADH1AP07327 375 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 GMPRP36959 345 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 DEFB132Q7Z7B7 95 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 PODXL2Q9NZ53 605 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
SCML2-202ENST00000398048 PLSCR1O15162 318 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms