RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 AK2P54819 239 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 MBD3O95983 291 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 SIRT2Q8IXJ6 389 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 RTCBQ9Y3I0 505 aaKnown RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
IFT140-202ENST00000397417 KRT32Q14532 448 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 R3HCC1Q9Y3T6 440 aaKnown RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 PLEKHG1Q9ULL1 1385 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 APOBRQ0VD83 1088 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 Q6ZUG5 572 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 MAGEB6Q8N7X4 407 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 USP21Q9UK80 565 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 ERBB3P21860 1342 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 SLFNL1Q499Z3 407 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 NCOA5Q9HCD5 579 aaKnown RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 STX6O43752 255 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
IFT140-202ENST00000397417 ORC3Q9UBD5 711 aaPredicted RBP13.1□□□□□ -0.31
IFT140-202ENST00000397417 CEP152O94986 1710 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
IFT140-202ENST00000397417 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 SLC4A4Q9Y6R1 1079 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 ABCA6Q8N139 1617 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 CYP27B1O15528 508 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
IFT140-202ENST00000397417 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
IFT140-202ENST00000397417 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 GIMAP6Q6P9H5 292 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 DNM1Q05193 864 aaKnown RBP13.08□□□□□ -0.32
IFT140-202ENST00000397417 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
IFT140-202ENST00000397417 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 MYL10Q9BUA6 226 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 RTL1A6NKG5 1358 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
IFT140-202ENST00000397417 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
IFT140-202ENST00000397417 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
IFT140-202ENST00000397417 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 NUP62CLQ9H1M0 184 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 EYA2O00167 538 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 CHMP4BP1P59074 171 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 PKP1Q13835 747 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 USP25Q9UHP3 1055 aa13.07□□□□□ -0.32
IFT140-202ENST00000397417 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
IFT140-202ENST00000397417 PKNOX2Q96KN3 472 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
IFT140-202ENST00000397417 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
IFT140-202ENST00000397417 TPTE2Q6XPS3 522 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
IFT140-202ENST00000397417 ZAP70P43403 619 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 CCDC96Q2M329 555 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 MFSD6Q6ZSS7 791 aa13.06□□□□□ -0.32
IFT140-202ENST00000397417 ABCC4O15439 1325 aa13.05□□□□□ -0.32
IFT140-202ENST00000397417 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
IFT140-202ENST00000397417 ANTXR1Q9H6X2 564 aa13.05□□□□□ -0.32
IFT140-202ENST00000397417 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
IFT140-202ENST00000397417 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
IFT140-202ENST00000397417 NAA16Q6N069 864 aaPredicted RBP13.05□□□□□ -0.32
IFT140-202ENST00000397417 MBD4O95243 580 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
IFT140-202ENST00000397417 TPM3P06753 285 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 PTH1RQ03431 593 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 SOGA3Q5TF21 947 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 B4E1Z4 1266 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms