RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
COL4A4-201ENST00000396625 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
COL4A4-201ENST00000396625 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
COL4A4-201ENST00000396625 ANKIB1Q9P2G1 1089 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 GJC1P36383 396 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 SKILP12757 684 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 HSPA1LP34931 641 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 GEN1Q17RS7 908 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 GKAP1Q5VSY0 366 aaPredicted RBP11.73□□□□□ -0.53
COL4A4-201ENST00000396625 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 UBLCP1Q8WVY7 318 aaPredicted RBP11.73□□□□□ -0.53
COL4A4-201ENST00000396625 PTGS1P23219 599 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 LIMCH1Q9UPQ0 1083 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 ATP5DP30049 168 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 NLRP5P59047 1200 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 DNAI1Q9UI46 699 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 PPFIA2O75334 1257 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 WDR78Q5VTH9 848 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
COL4A4-201ENST00000396625 METTL24Q5JXM2 366 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 STX6O43752 255 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 CA8P35219 290 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 HDXQ7Z353 690 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 MRVI1Q9Y6F6 885 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 IDEP14735 1019 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 IL1RAPL2Q9NP60 686 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 PHACTR2O75167 634 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 CCT6BQ92526 530 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 TSGA10Q9BZW7 698 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 SYT1P21579 422 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 HPDP32754 393 aaPredicted RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 TTF1Q15361 905 aaPredicted RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 USP37Q86T82 979 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 TBC1D31Q96DN5 1066 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 GJB2P29033 226 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 MAP7Q14244 749 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 LRRC9Q6ZRR7 1453 aa11.72□□□□□ -0.53
COL4A4-201ENST00000396625 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
COL4A4-201ENST00000396625 PPP2R1AP30153 589 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 STAT6P42226 847 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 MCUR1Q96AQ8 359 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 GAS8O95995 478 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 PHLDB2Q86SQ0 1253 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 ERCC5P28715 1186 aaPredicted RBP11.71□□□□□ -0.53
COL4A4-201ENST00000396625 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 UVSSAQ2YD98 709 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
COL4A4-201ENST00000396625 GSDMBQ8TAX9 411 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 ARID5AQ03989 594 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 ERMNQ8TAM6 284 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.54
COL4A4-201ENST00000396625 VAV2P52735 878 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 CCDC102BQ68D86 513 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 GTF3C6Q969F1 213 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 ZBTB9Q96C00 473 aa11.71□□□□□ -0.54
COL4A4-201ENST00000396625 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 UBA7P41226 1012 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 HCLS1P14317 486 aaPredicted RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 TACC3Q9Y6A5 838 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 KRT86O43790 486 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 SYKP43405 635 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 USH1CQ9Y6N9 552 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 MAK16Q9BXY0 300 aaKnown RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 RHOXF2BP0C7M4 288 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 RSPH3Q86UC2 560 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 RHOXF2Q9BQY4 288 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 VIMP08670 466 aaKnown RBP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 PLCB3Q01970 1234 aa11.7□□□□□ -0.54
COL4A4-201ENST00000396625 NOLC1Q14978 699 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL4A4-201ENST00000396625 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms