RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 USHBP1Q8N6Y0 703 aa9.34□□□□□ -0.91
RAB5CP1-201ENST00000395972 SPIRE2Q8WWL2 714 aa9.34□□□□□ -0.91
RAB5CP1-201ENST00000395972 NLRP7Q8WX94 980 aa9.34□□□□□ -0.91
RAB5CP1-201ENST00000395972 ZIC5Q96T25 663 aa9.34□□□□□ -0.91
RAB5CP1-201ENST00000395972 RPS6KA4O75676 772 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 AKAP4Q5JQC9 854 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 SAPCD2Q86UD0 394 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 NME9Q86XW9 330 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 SULF1Q8IWU6 871 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 ZNF622Q969S3 477 aaKnown RBP eCLIP9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 TMOD3Q9NYL9 352 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
RAB5CP1-201ENST00000395972 ZNF541Q9H0D2 1346 aa9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 POM121CA8CG34 1229 aa9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 E9PSI1 815 aa9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 TRPA1O75762 1119 aa9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 RSBN1LQ6PCB5 846 aaPredicted RBP9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
RAB5CP1-201ENST00000395972 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 CYP27B1O15528 508 aa9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 CELF2O95319 508 aaKnown RBP9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 NOGQ13253 232 aa9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 KTN1Q86UP2 1357 aaKnown RBP9.31□□□□□ -0.92
RAB5CP1-201ENST00000395972 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 AP1G2O75843 785 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 CD46P15529 392 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 TM4SF1P30408 202 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 SYNE4Q8N205 404 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 ATG3Q9NT62 314 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 RNF186Q9NXI6 227 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 SAGE1Q9NXZ1 904 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 CCDC88AQ3V6T2 1871 aa9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
RAB5CP1-201ENST00000395972 CUL9Q8IWT3 2517 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 LILRB3O75022 631 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 AMPHP49418 695 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
RAB5CP1-201ENST00000395972 SCN4AP35499 1836 aa9.28□□□□□ -0.92
RAB5CP1-201ENST00000395972 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
RAB5CP1-201ENST00000395972 ADAMTSL1Q8N6G6 1762 aa9.28□□□□□ -0.92
RAB5CP1-201ENST00000395972 HHIPL1Q96JK4 782 aa9.28□□□□□ -0.92
RAB5CP1-201ENST00000395972 CNTNAP4Q9C0A0 1308 aa9.28□□□□□ -0.92
RAB5CP1-201ENST00000395972 LTN1O94822 1766 aa9.27□□□□□ -0.92
RAB5CP1-201ENST00000395972 ZPR1O75312 459 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 SERPINB2P05120 415 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 HOXC9P31274 260 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 FOSBP53539 338 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 SMG6Q86US8 1419 aaKnown RBP9.27□□□□□ -0.93
RAB5CP1-201ENST00000395972 PRSS12P56730 875 aa9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 NFIXQ14938 502 aa9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 PPARGC1BQ86YN6 1023 aaKnown RBP9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 PRDM6Q9NQX0 595 aa9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 FAM208AQ9UK61 1670 aaKnown RBP9.26□□□□□ -0.93
RAB5CP1-201ENST00000395972 H0YGN5 161 aa9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 GPC2Q8N158 579 aa9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 ZDHHC16Q969W1 377 aa9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
RAB5CP1-201ENST00000395972 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 MOXD2PA6NHM9 499 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 HUNKP57058 714 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 QPCTQ16769 361 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 FBXO46Q6PJ61 603 aaPredicted RBP9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 SND1Q7KZF4 910 aaKnown RBP eCLIP9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 GLIS2Q9BZE0 524 aaPredicted RBP9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
RAB5CP1-201ENST00000395972 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
RAB5CP1-201ENST00000395972 COL9A1P20849 921 aa9.23□□□□□ -0.93
RAB5CP1-201ENST00000395972 FBLN1P23142 703 aa9.23□□□□□ -0.93
RAB5CP1-201ENST00000395972 EPS15P42566 896 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms