RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 TEX11Q8IYF3 940 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 TATDN2Q93075 761 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 CD163L1Q9NR16 1453 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 NEDD9Q14511 834 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC158Q5M9N0 1113 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 CC2D1AQ6P1N0 951 aaPredicted RBP11.3□□□□□ -0.6
CDRT1-204ENST00000395906 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
CDRT1-204ENST00000395906 CCAR2Q8N163 923 aaKnown RBP11.3□□□□□ -0.6
CDRT1-204ENST00000395906 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 ACEP12821 1306 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
CDRT1-204ENST00000395906 ERLIN2O94905 339 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 TUBB4AP04350 444 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 AP1ARQ63HQ0 302 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC34Q96HJ3 373 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 TECPR2O15040 1411 aa11.3□□□□□ -0.6
CDRT1-204ENST00000395906 PROSER2Q86WR7 435 aaPredicted RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
CDRT1-204ENST00000395906 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
CDRT1-204ENST00000395906 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 GCFC2P16383 781 aaKnown RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 NGDNQ8NEJ9 315 aaKnown RBP11.29□□□□□ -0.6
CDRT1-204ENST00000395906 SLC24A3Q9HC58 644 aa11.29□□□□□ -0.6
CDRT1-204ENST00000395906 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
CDRT1-204ENST00000395906 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 SKILP12757 684 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 TRIM27P14373 513 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 PAX7P23759 505 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 MTA1Q13330 715 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 SNW1Q13573 536 aaKnown RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 KAT2BQ92831 832 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
CDRT1-204ENST00000395906 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 TCHHQ07283 1943 aa11.28□□□□□ -0.6
CDRT1-204ENST00000395906 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 COQ9O75208 318 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 PPFIA4O75335 1185 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.6
CDRT1-204ENST00000395906 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 LUZP1Q86V48 1076 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.6
CDRT1-204ENST00000395906 PRDM16Q9HAZ2 1276 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 ARFGAP3Q9NP61 516 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 TRMT1Q9NXH9 659 aaKnown RBP11.27□□□□□ -0.6
CDRT1-204ENST00000395906 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.6
CDRT1-204ENST00000395906 H3BQF6 201 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDRT1-204ENST00000395906 TBC1D8BQ0IIM8 1120 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 CRYMQ14894 314 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
CDRT1-204ENST00000395906 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 LRRC31Q6UY01 552 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 DDX17Q92841 729 aaKnown RBP11.27□□□□□ -0.61
CDRT1-204ENST00000395906 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
CDRT1-204ENST00000395906 ORAI2Q96SN7 254 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 SH3GL3Q99963 347 aa11.27□□□□□ -0.61
CDRT1-204ENST00000395906 PHF23Q9BUL5 403 aaPredicted RBP11.27□□□□□ -0.61
CDRT1-204ENST00000395906 EFCAB8A8MWE9 144 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 MAFGO15525 162 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 GRIK3Q13003 919 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 CPLX2Q6PUV4 134 aaKnown RBP11.26□□□□□ -0.61
CDRT1-204ENST00000395906 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
CDRT1-204ENST00000395906 FUT8Q9BYC5 575 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 VPS18Q9P253 973 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 CPS1P31327 1500 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 TADA3O75528 432 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
CDRT1-204ENST00000395906 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
CDRT1-204ENST00000395906 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
CDRT1-204ENST00000395906 ATP7BP35670 1465 aa11.26□□□□□ -0.61
CDRT1-204ENST00000395906 TMCO5BA8MYB1 307 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 CAND2O75155 1236 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 GPTP24298 496 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 TYRO3Q06418 890 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 DDR1Q08345 913 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 TRAF1Q13077 416 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-204ENST00000395906 N4BP2L2Q92802 583 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-204ENST00000395906 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms