RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 ZNF609O15014 1411 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 LRP6O75581 1613 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 TAF6LQ9Y6J9 622 aa16.64■□□□□ 0.25
SNCAIP-204ENST00000395466 EYA2O00167 538 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 KCNJ4P48050 445 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 KAT6BQ8WYB5 2073 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 CHGBP05060 677 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 ROBO1Q9Y6N7 1651 aa16.63■□□□□ 0.25
SNCAIP-204ENST00000395466 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 CIAO1O76071 339 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 PSMA5P28066 241 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 ME3Q16798 604 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
SNCAIP-204ENST00000395466 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 SYT1P21579 422 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 SMC3Q9UQE7 1217 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 BCL9O00512 1426 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 STX6O43752 255 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 MBD3O95983 291 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 PLA2G12BQ9BX93 195 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
SNCAIP-204ENST00000395466 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 TIMM10P62072 90 aa16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-204ENST00000395466 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 MYH3P11055 1940 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 NUP98P52948 1817 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 STARD3NLO95772 234 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 GJB2P29033 226 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 TICAM2Q86XR7 235 aa16.59■□□□□ 0.25
SNCAIP-204ENST00000395466 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 F13A1P00488 732 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 CSF1RP07333 972 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 NECAB1Q8N987 351 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 PAG1Q9NWQ8 432 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 MTMR6Q9Y217 621 aa16.58■□□□□ 0.24
SNCAIP-204ENST00000395466 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 GADD45BO75293 160 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
SNCAIP-204ENST00000395466 GOLIM4O00461 696 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms