RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 SZT2Q5T011 3432 aa18.6■□□□□ 0.57
PFDN6-204ENST00000395131 YDJCA8MPS7 323 aa18.59■□□□□ 0.57
PFDN6-204ENST00000395131 GPR25O00155 361 aa18.59■□□□□ 0.57
PFDN6-204ENST00000395131 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
PFDN6-204ENST00000395131 CFHR5Q9BXR6 569 aa18.59■□□□□ 0.57
PFDN6-204ENST00000395131 PAPPA2Q9BXP8 1791 aa18.59■□□□□ 0.57
PFDN6-204ENST00000395131 EGFRP00533 1210 aa18.58■□□□□ 0.56
PFDN6-204ENST00000395131 FKBP1BP68106 108 aa18.58■□□□□ 0.56
PFDN6-204ENST00000395131 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-204ENST00000395131 COLQQ9Y215 455 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-204ENST00000395131 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
PFDN6-204ENST00000395131 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
PFDN6-204ENST00000395131 TM4SF4P48230 202 aa18.57■□□□□ 0.56
PFDN6-204ENST00000395131 TBC1D10BQ4KMP7 808 aaPredicted RBP18.57■□□□□ 0.56
PFDN6-204ENST00000395131 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
PFDN6-204ENST00000395131 MPNDQ8N594 471 aa18.57■□□□□ 0.56
PFDN6-204ENST00000395131 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
PFDN6-204ENST00000395131 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
PFDN6-204ENST00000395131 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
PFDN6-204ENST00000395131 BBOX1O75936 387 aa18.56■□□□□ 0.56
PFDN6-204ENST00000395131 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
PFDN6-204ENST00000395131 KIAA0100Q14667 2235 aaKnown RBP18.55■□□□□ 0.56
PFDN6-204ENST00000395131 RPS12P25398 132 aaKnown RBP18.55■□□□□ 0.56
PFDN6-204ENST00000395131 CDCA5Q96FF9 252 aa18.55■□□□□ 0.56
PFDN6-204ENST00000395131 NLRP3Q96P20 1036 aa18.55■□□□□ 0.56
PFDN6-204ENST00000395131 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
PFDN6-204ENST00000395131 ABCC4O15439 1325 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 FKTNO75072 461 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 NTSR2O95665 410 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 SULF1Q8IWU6 871 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 LAMB4A4D0S4 1761 aa18.54■□□□□ 0.56
PFDN6-204ENST00000395131 PSMD14O00487 310 aa18.53■□□□□ 0.56
PFDN6-204ENST00000395131 ZNF34Q8IZ26 560 aa18.53■□□□□ 0.56
PFDN6-204ENST00000395131 DUOX1Q9NRD9 1551 aa18.53■□□□□ 0.56
PFDN6-204ENST00000395131 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
PFDN6-204ENST00000395131 SLC17A8Q8NDX2 589 aa18.52■□□□□ 0.56
PFDN6-204ENST00000395131 LAMB2P55268 1798 aa18.52■□□□□ 0.55
PFDN6-204ENST00000395131 HTTP42858 3142 aa18.52■□□□□ 0.55
PFDN6-204ENST00000395131 TRIOBPQ9H2D6 2365 aa18.51■□□□□ 0.55
PFDN6-204ENST00000395131 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
PFDN6-204ENST00000395131 LRRC37AA6NMS7 1700 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 GPTP24298 496 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
PFDN6-204ENST00000395131 RBM26Q5T8P6 1007 aaKnown RBP18.5■□□□□ 0.55
PFDN6-204ENST00000395131 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 OTUD5Q96G74 571 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 BRCA2P51587 3418 aa18.5■□□□□ 0.55
PFDN6-204ENST00000395131 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
PFDN6-204ENST00000395131 CENPFP49454 3210 aa18.49■□□□□ 0.55
PFDN6-204ENST00000395131 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
PFDN6-204ENST00000395131 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
PFDN6-204ENST00000395131 EN2P19622 333 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-204ENST00000395131 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
PFDN6-204ENST00000395131 TTLL7Q6ZT98 887 aa18.47■□□□□ 0.55
PFDN6-204ENST00000395131 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
PFDN6-204ENST00000395131 TAF1P21675 1872 aa18.47■□□□□ 0.55
PFDN6-204ENST00000395131 ASTN2O75129 1339 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-204ENST00000395131 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
PFDN6-204ENST00000395131 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
PFDN6-204ENST00000395131 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.55
PFDN6-204ENST00000395131 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
PFDN6-204ENST00000395131 TMC4Q7Z404 712 aa18.46■□□□□ 0.55
PFDN6-204ENST00000395131 ARMC5Q96C12 935 aa18.46■□□□□ 0.55
PFDN6-204ENST00000395131 RTL9Q8NET4 1388 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 SREBF2Q12772 1141 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 CEP290O15078 2479 aa18.45■□□□□ 0.54
PFDN6-204ENST00000395131 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 ZNF609O15014 1411 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 VIL1P09327 827 aaKnown RBP18.44■□□□□ 0.54
PFDN6-204ENST00000395131 GRAPQ13588 217 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 ANGEL2Q5VTE6 544 aaKnown RBP18.44■□□□□ 0.54
PFDN6-204ENST00000395131 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
PFDN6-204ENST00000395131 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 PITPNM2Q9BZ72 1349 aa18.44■□□□□ 0.54
PFDN6-204ENST00000395131 UBE2Q2LH0YL09 131 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 ALDH1A1P00352 501 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
PFDN6-204ENST00000395131 MOB2Q70IA6 237 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
PFDN6-204ENST00000395131 ZBTB3Q9H5J0 574 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 CUL9Q8IWT3 2517 aa18.43■□□□□ 0.54
PFDN6-204ENST00000395131 SCARF1Q14162 830 aa18.42■□□□□ 0.54
PFDN6-204ENST00000395131 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
PFDN6-204ENST00000395131 LAMB1P07942 1786 aa18.42■□□□□ 0.54
PFDN6-204ENST00000395131 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
PFDN6-204ENST00000395131 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
PFDN6-204ENST00000395131 PSME4Q14997 1843 aa18.41■□□□□ 0.54
PFDN6-204ENST00000395131 H0YGN5 161 aa18.4■□□□□ 0.54
PFDN6-204ENST00000395131 ECE2O60344 883 aa18.4■□□□□ 0.54
PFDN6-204ENST00000395131 MCM10Q7L590 875 aa18.4■□□□□ 0.54
PFDN6-204ENST00000395131 COL6A3P12111 3177 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms